Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0544 ATGGCCCATACAGCTGCAGTGATAATACCACCTTTGTCGCTCATGATATCGCCTTCATCTGTAAATCCAACGGTCATAGTTCACTTCACACAAACAACATCGTGTGTACCAGCCGTTGTCAATACTTTTTCCCCACATATAAAATGCCAAGAGCAAACCCAAGTTGCATCACGATCCTCGGTGGTGGTCTGCAACTCGGACTTTACTGTGATGGCGTCCACACTGCCGGAGAATCTCACCAGAGAGCAGTACGTGTACCTGGCCAAACTCGCCGAGCAAGCCGAGCGATATGAGGAGATGGTCAAATTCATGGAAAAGCTTGTAATCGGGTGGACCTCCATGTCGGAGCTCACCGTCGAGGAGAGGAACCTCCTCTCCGTGGCCTACAAGAACGTGATCGGCTCGCTCCGAGCCGCGTGGAGGATTGTGTCGTCGATAGAGCAGAAGGAGGAGAGTCGCAAGAACGAGGAGCATGTGGCTCTTGTCAAAGACTACAGATCCACGGTGGAGACGGAGCTCTCCGAGGTCTGTGCTGGTATTTTGAAGCTCTTGGACTCGCATCTGATACCTTCGGCTTCCACAAGCGAGTCCAAGGTGTTTTACATGAAGATGAAGGGGGACTACCACAGGTATTTAGCTGAGTTCAAGGTTGGGAATGAGAAGAAGGATGCCGCCGAGGAGACTATGTTAGCATACAAGTCTGCTCAGGATATTGCTCTAGCTGATCTGGCCCCGACTCATCCAATAAGGTTGGGCTTGGCGCTCAATTTCTCTGTGTTTTACTATGAGATTCTCAATTCATCGGATAAGGCCTGTAGCATGGCCAAACAGGCATTTGAGGAAGCCATTGCTGAGTTGGACACTCTGGGAGAAGAATCATACAAGGACAGCACTCTTATCATGCAACTGCTGAGGGACAATCTTACTCTTTGGACTTCAGATGCTCAGGACCAGTTGGATGAGCCATAG 969 0.5005 MAHTAAVIIPPLSLMISPSSVNPTVIVHFTQTTSCVPAVVNTFSPHIKCQEQTQVASRSSVVVCNSDFTVMASTLPENLTREQYVYLAKLAEQAERYEEMVKFMEKLVIGWTSMSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVALVKDYRSTVETELSEVCAGILKLLDSHLIPSASTSESKVFYMKMKGDYHRYLAEFKVGNEKKDAAEETMLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDEP* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0544 322 Coils Coil 87 107 - -
Vvi18g0544 322 ProSitePatterns 14-3-3 proteins signature 1. 122 132 IPR023409 -
Vvi18g0544 322 PRINTS 14-3-3 protein zeta signature 231 257 IPR000308 -
Vvi18g0544 322 PRINTS 14-3-3 protein zeta signature 116 145 IPR000308 -
Vvi18g0544 322 PRINTS 14-3-3 protein zeta signature 196 218 IPR000308 -
Vvi18g0544 322 PRINTS 14-3-3 protein zeta signature 285 314 IPR000308 -
Vvi18g0544 322 PRINTS 14-3-3 protein zeta signature 165 189 IPR000308 -
Vvi18g0544 322 PRINTS 14-3-3 protein zeta signature 258 284 IPR000308 -
Vvi18g0544 322 FunFam 14-3-3 protein epsilon 78 322 - -
Vvi18g0544 322 SUPERFAMILY 14-3-3 protein 80 314 IPR036815 -
Vvi18g0544 322 Pfam 14-3-3 protein 87 312 IPR023410 -
Vvi18g0544 322 ProSitePatterns 14-3-3 proteins signature 2. 294 313 IPR023409 -
Vvi18g0544 322 SMART 1433_4 81 321 IPR023410 -
Vvi18g0544 322 Gene3D - 64 321 IPR036815 -
Vvi18g0544 322 PANTHER 14-3-3 PROTEIN 81 316 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0544 Vvi-Chr18 5477899 5481332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0544 71 316 14-3-3 family AT5G65430 85.772 1.66e-156 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0544 K06630 - vvi:100854545 490.73