Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0524 ATGGCTGGAAATGGAGATGGAGTGCAGTTGCTTGGGTATTGGGCAAGTCCTTTTGCCCTGAGAATTAAATGGGCTTTGAAGCTGAAAGAAATCCATTATGAGTATGTGGAAGACCATCTCCTAGACAAGAGTCCTATGCTTTTGCAGTACAACCCTGTTCATAAGAAGATTCCAGTTCTTGTGCACAAGGCATTTTCCAAGGTAGGGGCGGAGCAGGAGCAAGCTGCAAAAGAGCTTCGAGAGAATCTGAAAACTCTGGAGAGTGCTCTGGAGGGGAAGCACTTTTTTGGGGGTGAAACAATAGGCTTTCTAGACATTGCTGTTGGCTGGATTGGATGCTGGGCTCGAATGAATGAGGAAGTTGCTGGTGTAAACATGATTGATGTAGAGATGACGCCTTTGCTCGGTGCATGGTTCCAGAAATTCCTCAAGCTTCCTATTATCAAAGAATGTTTGCCACCTCAAGATAAATTGCTAGTGCACACCAAAGAATTCCACAAGATGTTGATGGCTGCATTGACTTGA 525 0.4495 MAGNGDGVQLLGYWASPFALRIKWALKLKEIHYEYVEDHLLDKSPMLLQYNPVHKKIPVLVHKAFSKVGAEQEQAAKELRENLKTLESALEGKHFFGGETIGFLDIAVGWIGCWARMNEEVAGVNMIDVEMTPLLGAWFQKFLKLPIIKECLPPQDKLLVHTKEFHKMLMAALT* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0524 174 Coils Coil 69 89 - -
Vvi18g0524 174 Gene3D - 34 173 - -
Vvi18g0524 174 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 63 IPR045073 -
Vvi18g0524 174 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 30 165 IPR010987 -
Vvi18g0524 174 FunFam Glutathione transferase32 47 173 - -
Vvi18g0524 174 SUPERFAMILY GST C-terminal domain-like 50 169 IPR036282 -
Vvi18g0524 174 Pfam Glutathione S-transferase, N-terminal domain 8 63 IPR004045 -
Vvi18g0524 174 Pfam Glutathione S-transferase, C-terminal domain 61 146 IPR004046 -
Vvi18g0524 174 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 87 IPR004045 -
Vvi18g0524 174 SUPERFAMILY Thioredoxin-like 5 62 IPR036249 -
Vvi18g0524 174 CDD GST_C_Tau 53 165 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0524 Vvi-Chr18 5244641 5245588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0524 8 159 Glutathione S-transferase Gene Family AT3G09270 37.561 6.33e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0524 K00799 - zju:107411172 217.624