Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0516 ATGGCTTCCCCATCCTTGTTGTCCTTATTCTTCATATTTTCGCTTCTACTGGGGATGGCACATGCACATTATCTATCCCCCAACTTCTATGCAAGATCATGCCCTAGGGCTCTCCCTACCATTCGAACTGCAGTAAACAAAGCAGTGGCCAAAGAGAAACGCATGGGGGCCTCATTGCTCCGCCTCCATTTCCATGATTGCTTCGTATTGGGATGTGATGCTTCTATATTATTGGATGACACTGCAACCTTTACTGGAGAGAAGACAGCAGGACCAAATAACAACTCTGTGAGAGGATATGAGGTGATCGACACCATTAAATCTCAAGTGGAAAGTTTGTGCCCTGGAGTTGTCTCTTGTGCAGATATTGTAGCAGTGGCAGCTCGTGACTCGGTTGTCGCTTTGGGTGGCCCAACATGGACTGTGCAATTGGGCAGAAGAGATTCAACCACGGCGAGTTTTAGTACTGCTAACTCTGACCTCCCTGCTCCGACCTCAGATCTTGATGCTCTTATATCTCTCTTCTCCAACAAGGGCTTCACTACCCAGGAAATGGTGGTTCTCTCAGGAACTCATACCATAGGTAAAGCACAATGCATAAAATTTCGGTATCGAATTTACAACGAGACCAACGTCGATGCTGCATTTGCAAAATCAAAACAGAAAATCTGCCCATGGACAGGCGGGGATGAGAATCTGTCTGATCTGGATGAAACGACTACTGTTTTCGATACTGTTTATTTCAAGGATTTGATAGAGAAGAAGGGTCTGTTGCACTCAGACCAACAACTTTACAATGGTAACTCCACAGATTCCATGGTCGAAACCTACAGCACCGACTCTACCACTTTCTTTACCGATGTGGCCAACGCCATGGTTAAAATGGGAAACTTGAGTCCCCTGACCGGCACTGATGGAGAGATCAGGACAAACTGCAGGAAAATCAATGGATAA 954 0.4591 MASPSLLSLFFIFSLLLGMAHAHYLSPNFYARSCPRALPTIRTAVNKAVAKEKRMGASLLRLHFHDCFVLGCDASILLDDTATFTGEKTAGPNNNSVRGYEVIDTIKSQVESLCPGVVSCADIVAVAARDSVVALGGPTWTVQLGRRDSTTASFSTANSDLPAPTSDLDALISLFSNKGFTTQEMVVLSGTHTIGKAQCIKFRYRIYNETNVDAAFAKSKQKICPWTGGDENLSDLDETTTVFDTVYFKDLIEKKGLLHSDQQLYNGNSTDSMVETYSTDSTTFFTDVANAMVKMGNLSPLTGTDGEIRTNCRKING* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0516 317 FunFam Peroxidase 162 295 - -
Vvi18g0516 317 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vvi18g0516 317 CDD secretory_peroxidase 25 315 IPR033905 GO:0004601|GO:0042744
Vvi18g0516 317 ProSiteProfiles Plant heme peroxidase family profile. 24 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 FunFam Peroxidase 28 167 - -
Vvi18g0516 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vvi18g0516 317 Gene3D Peroxidase, domain 2 162 295 - -
Vvi18g0516 317 SUPERFAMILY Heme-dependent peroxidases 25 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PANTHER PEROXIDASE 72-RELATED 22 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 Gene3D - 28 313 - -
Vvi18g0516 317 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 Pfam Peroxidase 42 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g0516 317 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0516 Vvi-Chr18 5092206 5123595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0516 1 316 Peroxidase AT5G05340 58.333 1.09e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0516 K00430 - vvi:100267701 566.614