Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0451 ATGGAGGAAAGAGAGCAACAGGTTTACTTGGCTAGGCTTGCTGAGCAAGCTGAGAGATATGATGAGATGGTTGAAGCAATGAAGAAAGTTGCTAAATTGGATGTGGAACTGACAGTGGAGGAGAGGAATCTGGTATCTGTTGGATATAAAAATGTTATTGGGGCAAGAAGGGCATCATGGAGGATATTGTCTTCCATTGAACAGAAGGAGGAGACCAGGGGAAATGAGCAAAATGCAAAAAGGATAAAGGATTACAGACAAAGGGTTGAAGATGAGCTGTCAAAGATCTGCAATGACATATTGTCCGTCATTGATAATCATCTCATCCCATCATCCTCAACAGGGGAATCAACTGTTTTCTACTATAAGATGAAAGGAGATTACTACCGATATTTAGCTGAATTCAAAGCAGGGAATGACCGTAAAGAAGCTGCTGATCAGTCACTTAAGGCCTATGAGGCTGCCACCAGTACAGCTGCCTCAGATCTGCCGCCTACTCATCCAATCAGACTTGGGCTGGCTTTGAACTTTTCTGTCTTCTACTATGAAATTTTGAACTCCCCAGAGAGGGCTTGCCACCTTGCAAAACAAGCTTTTGATGAGGCTATTGCAGAACTTGATAGCCTGAATGAAGAATCATACAAGGATAGTACCCTTATTATGCAGCTTCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGAGTTAG 759 0.4321 MEEREQQVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEETRGNEQNAKRIKDYRQRVEDELSKICNDILSVIDNHLIPSSSTGESTVFYYKMKGDYYRYLAEFKAGNDRKEAADQSLKAYEAATSTAASDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGETSKADEPQAES* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0451 252 SMART 1433_4 4 245 IPR023410 -
Vvi18g0451 252 Pfam 14-3-3 protein 10 232 IPR023410 -
Vvi18g0451 252 SUPERFAMILY 14-3-3 protein 1 234 IPR036815 -
Vvi18g0451 252 Coils Coil 192 212 - -
Vvi18g0451 252 PIRSF 14-3-3 1 247 IPR000308 -
Vvi18g0451 252 Gene3D - 1 244 IPR036815 -
Vvi18g0451 252 FunFam 14-3-3 protein epsilon 1 245 - -
Vvi18g0451 252 ProSitePatterns 14-3-3 proteins signature 1. 42 52 IPR023409 -
Vvi18g0451 252 ProSitePatterns 14-3-3 proteins signature 2. 214 233 IPR023409 -
Vvi18g0451 252 Coils Coil 10 30 - -
Vvi18g0451 252 PANTHER 14-3-3 PROTEIN 4 234 IPR000308 -
Vvi18g0451 252 PRINTS 14-3-3 protein zeta signature 178 204 IPR000308 -
Vvi18g0451 252 PRINTS 14-3-3 protein zeta signature 205 234 IPR000308 -
Vvi18g0451 252 PRINTS 14-3-3 protein zeta signature 36 65 IPR000308 -
Vvi18g0451 252 PRINTS 14-3-3 protein zeta signature 85 109 IPR000308 -
Vvi18g0451 252 PRINTS 14-3-3 protein zeta signature 116 138 IPR000308 -
Vvi18g0451 252 PRINTS 14-3-3 protein zeta signature 151 177 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0451 Vvi-Chr18 4453630 4457803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0451 3 252 14-3-3 family AT1G34760 83.600 8.96e-156 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0451 K06630 - vvi:100247183 495.738