Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0405 ATGGGGCCCCATTCAACTGATGAGGTGCCAGAAGCGAAAGAGGACATTCGTAGCCTGTCATCCTCACACAGACATACGCCGAACTTGCCGTACATGCACAAGGTGGGAGTTCCCCCTAAGCAAAATCTCTTCAAGGAATTCAAAACCACAGTGAAGGAGACGTTCTTTGCAGATGATCCTCTTCGCTCTTTCAAGGATCAATCTAAATCTCGGAAGTTCATTCTAGGCATCCAGGCTATTTTCCCCATTCTTGAATGGGGGAGAAGCTACAACCTAACTAAGTTTAGAGGGGATCTCATTGCTGGACTCACCATTGCAAGTCTCTGCATTCCTCAGGATATCGGGTATGCAAAACTTGCATCTTTGGAACCTCAGTATGGGCTATACTCCAGCTTCGTTCCTCCACTGATTTATGCCTTCATGGGCAGTTCAAGAGACATAGCCATAGGGCCAGTTGCTGTGGTGTCTCTCTTACTAGGAAGTCTGCTTCGGGCAGAGATTGATCCCACAGAAAATCCAGCAGAGTATCTGCGGCTTGCATTCACAGCTACATTTTTTGCTGGGATCACACAAGCCACACTTGGATTTTTTAGATTAGGTTTCTTGATCGATTTCTTATCCCATGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCGATTACAATAGCCCTCCAACAGCTTAAAGGTTTTCTTGGCATCAAGAATTTCACAAAGGAAACTGATATTATTTCTGTAATGCATTCAGTATGGGCCTCAGTTCATCACGGGTGGAACTGGCAGACTATAGTCATTGGGGCTACCTTTTTGGGTTTTCTTCTATTTGCTAAGTACATTGGAAAGAAGAACAAGAAATTTTTCTGGGTACCTGCAATTGCTCCATTGATATCAGTTATTCTGTCTACCTTCTTCGTGTACATTACCCGTGCAGATAAGAAAGGTGTTCAAATTGTGAAACACATAGATAAAGGAATCAATCCTTCATCTGCAAGTCAAATATATTTCAGTGGTGTTTATCTCCTAAAAGGATTTAAAATTGGTGTTGTGGCTGGTTTGATAGCATTGACGGAAGCCGTGGCAATTGGCAGAACATTTGCTTCCATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCCCTAGGAGCAATGAATATTGTTGGTTCAATGACTTCTTGCTATGTGGCAACAGGTTCCTTCTCTCGTTCAGCAGTAAACTACATGGCCGGATGCAAGACTGCAGTCTCTAACATTGTGATGTCCTGTGTTGTATTCCTAACCCTGGAATTCATCACACCTCTTTTCAAATACACCCCAAATGCCATTCTTGCTTCCATCATTATATCTGCTGTGATTGGCCTAATTGACTACGATGCAGCAATTCTGATATGGAAGATTGATAAATTTGATTTTGTTGCTTGCATGGGAGCCTTCTTTGGTGTGGTTTTTAAATCTGTTGAGATTGGTCTCTTAATTGCGGTTGCCATATCCTTTGCCAAGATCCTCCTACAAGTTACAAGGCCAAGGACTGCAATTCTTGGGAAGCTCCCTAGGACAACTGTTTACAGGAACATCCAACAATATCCAGAGGCAACTAAAATTCCAGGCTTGTTAATTGTGAGGATTGATTCTGCAATCTACTTTTCCAATTCTAACTACGTCAAGGAAAGGATACTGAGATGGTTGACTGATGAGGAAGAACACTTGAAAAAAGCCAACCTACCAAGAGTTCAATTTTTGATTGTTGAGATGTCCCCTGTAACTGACATAGACACCAGTGGCATCCATGCATTGGAAGAGTTACACAGGAGTCTCCTAAAGAGAGATGTCAAACTGGTTCTGGCAAATCCTGGGCAAGTGGTTATCGACAAGCTTCATGCATCCAAGTTCGCAGATGATATCGGCGAGGACAAGATCTTTCTCACGGTTGGAGATGCTGTCGTAACCTGCTCTCCCAAGTTGGCAGAGGAAGTTTAA 1977 0.431 MGPHSTDEVPEAKEDIRSLSSSHRHTPNLPYMHKVGVPPKQNLFKEFKTTVKETFFADDPLRSFKDQSKSRKFILGIQAIFPILEWGRSYNLTKFRGDLIAGLTIASLCIPQDIGYAKLASLEPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGSLLRAEIDPTENPAEYLRLAFTATFFAGITQATLGFFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKETDIISVMHSVWASVHHGWNWQTIVIGATFLGFLLFAKYIGKKNKKFFWVPAIAPLISVILSTFFVYITRADKKGVQIVKHIDKGINPSSASQIYFSGVYLLKGFKIGVVAGLIALTEAVAIGRTFASMKDYQLDGNKEMVALGAMNIVGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSCVVFLTLEFITPLFKYTPNAILASIIISAVIGLIDYDAAILIWKIDKFDFVACMGAFFGVVFKSVEIGLLIAVAISFAKILLQVTRPRTAILGKLPRTTVYRNIQQYPEATKIPGLLIVRIDSAIYFSNSNYVKERILRWLTDEEEHLKKANLPRVQFLIVEMSPVTDIDTSGIHALEELHRSLLKRDVKLVLANPGQVVIDKLHASKFADDIGEDKIFLTVGDAVVTCSPKLAEEV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0405 658 MobiDBLite consensus disorder prediction 1 21 - -
Vvi18g0405 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Vvi18g0405 658 SUPERFAMILY SpoIIaa-like 529 650 IPR036513 -
Vvi18g0405 658 NCBIfam sulfate permease 82 646 IPR001902 GO:0016020|GO:0055085
Vvi18g0405 658 PANTHER SULFATE TRANSPORTER 41 651 IPR001902 GO:0016020|GO:0055085
Vvi18g0405 658 FunFam Sulfate transporter 31 507 653 - -
Vvi18g0405 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020
Vvi18g0405 658 MobiDBLite consensus disorder prediction 1 32 - -
Vvi18g0405 658 Pfam STAS domain 528 646 IPR002645 -
Vvi18g0405 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Vvi18g0405 658 Gene3D STAS domain 507 653 IPR036513 -
Vvi18g0405 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0405 Vvi-Chr18 4064225 4068781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0405 14 658 Inorganic Solute Cotransporters AT1G22150 78.858 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0405 K17470 - vvi:100233023 1186.79