Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0382 ATGGCGTCTGCAAACAGATCTCAGCAGTCAAAGTTTCCACAAGGGTATCTCTACCATCTGATCTTTAATGAGCTTCAGACCCAGTTGGGAAATGTGGGCAAACCTTTAAGTAGTATGTATTTGGATGAGTTACTGAAACATGTGATATCTGCTGAAAAGGGCCAGTACTTCATGCAAAACCCTGCTGCTTCTTCCTCCTCTTCTTCTTCATCACCCGCTTCCTTGTTTCTTGGGAATTTCAATTTGAATGGGGTTCTGGATAAGAAAACAGTTGAAGAGGTCTGGGAGGAAATCCTTCATCACCAGCATCTCAGTGGTGCAGATAATGGACCAATCCAGCACCTTTCGACACTGGGCGAAACAACTCTTGAGGAGTTTCTAGTGCGCGCAGGTGTGATTAGTTTAGGGAATCAGAATGGTAGTACTGCAAACGCTCAGCCATTCATGACGATGGATCCAATGGCAGTGGTGCCTCAACAGCCAGCTGATTGGTTTCAGCTTCCGGTGGAAGCTGCTCAGCAGCAGCAACCAGGAGTGTTGGACTCAAGTTTCCATGTTTCTGAATCAGTTTTCGAGGGTCCAGCCATTGAGATTGGTTACTCTAAGAACCAAATGGCTATGTCAACGGCAGTACCGGCAGTGACAACATCATCTCCAAACTCCCCGGTTGCTGTTGAAAGGAAGCGCTGGTTTTCAGATGAGATGATGAAGACCATTGAGAGGAGGCAGAAGAGGATGATCAAGAACCGTGAGTCGGCTGCTAGGTCAAGGGCAAGGAAGCAGGCTTATACCAATCACTTGGAGCATGAAGTCCATCAGTTGAAGAAAGAGAACGACTTGCTCATAAGGCTAAAGGAATTGCAGATGCGGTGGTCTTTGAATCCAACACCGGGGCCCAAATACCAACTGCGGCGTACCAGCTCGTGTCTGTTCTAG 936 0.4744 MASANRSQQSKFPQGYLYHLIFNELQTQLGNVGKPLSSMYLDELLKHVISAEKGQYFMQNPAASSSSSSSSPASLFLGNFNLNGVLDKKTVEEVWEEILHHQHLSGADNGPIQHLSTLGETTLEEFLVRAGVISLGNQNGSTANAQPFMTMDPMAVVPQQPADWFQLPVEAAQQQQPGVLDSSFHVSESVFEGPAIEIGYSKNQMAMSTAVPAVTTSSPNSPVAVERKRWFSDEMMKTIERRQKRMIKNRESAARSRARKQAYTNHLEHEVHQLKKENDLLIRLKELQMRWSLNPTPGPKYQLRRTSSCLF* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0382 311 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 239 292 - -
Vvi18g0382 311 Pfam bZIP transcription factor 241 288 IPR004827 GO:0003700|GO:0006355
Vvi18g0382 311 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 239 281 IPR004827 GO:0003700|GO:0006355
Vvi18g0382 311 SMART brlzneu 237 290 IPR004827 GO:0003700|GO:0006355
Vvi18g0382 311 SUPERFAMILY Leucine zipper domain 241 284 IPR046347 GO:0003700|GO:0006355
Vvi18g0382 311 CDD bZIP_plant_BZIP46 241 291 - -
Vvi18g0382 311 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 244 259 IPR004827 GO:0003700|GO:0006355
Vvi18g0382 311 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 309 IPR043452 GO:0003700|GO:0045893
Vvi18g0382 311 Gene3D - 239 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0382 Vvi-Chr18 3875315 3878509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0382 14 311 bZIP Transcription Factor Family AT3G56850 37.654 2.96e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi18g0382 bZIP_1 9.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0382 K14432 - vvi:100242121 602.823