Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0367 ATGGGTTCGATAGACGCACCGACGTTTACACAGAACGGCTCGGACGCAACTGTCGCCGCCGATGGACCACCGCCGCCTGTACCTGATTCCGCCATCATGACAATGGAAAAGACACTAGAGGCTGACTCATCCAGGAAGAGGAGGTTCGGTATTCTTCCTCTGGAGGTGGGCACTCGCGTCATGTGCCGTTGGAGGGACGGAAAATATCATCCCGTCAAGGTCATTGAACGCCGTAAAATGCATATCGGCGGTGTCAATGATTACGAGTATTATGTTCATTACACGGAATTCAATAGGAGGCTTGATGAATGGGTTAAGCTTGAACAACTTGATCTTGAATCCGTAGAGGCTGTTGTTGATGAAAAGGTGGAGGACAAGGTAACTAGCTTGAAAATGACACGCCATCAGAAGCGTAAGATTGATGAGACACATGTAGAGGGCCATGAAGAGCTTGATGCTGCCAGCTTGCGTGAGCATGAAGAATTTACAAAAGTGAAAAATATAGCAACTATAGAACTTGGGAGATATGAAATCGAAACATGGTATTTCTCTCCCTTTCCACCAGAATACAATGACTCTCTGAAGCTGTACTTCTGTGAGTTTTGCCTCAATTTCATGAAGCGGAAAGAACAGCTTCAGAGGCATATGAGGAAATGTGATCTCAAGCATCCCCCTGGAGATGAGATATACCGAAGTGGCACATTATCAATGTTTGAGGTTGATGGCAAAAAGAACAAGGTTTATGGGCAGAACCTCTGTTATTTGGCAAAATTGTTTCTTGATCACAAGACCCTCTATTATGACGTTGACCTGTTTCTATTTTATGTGCTGTGTGAATGTGATGATCGTGGATGCCACATGGTCGGATATTTTTCTAAGGAAAAGCATTCAGAGGAATCCTATAATTTAGCCTGCATTCTCACCCTTCCTCCATATCAAAGGAAAGGTTACGGGAAATTCCTAATTGCATTCTCATATGAACTTTCCAAGAAAGAAGGCAAAGTCGGTACACCTGAAAGACCCCTTTCTGACTTAGGGCTGTTGAGCTATCGGGGATACTGGACCCGTGTCCTTCTAGACATCTTGAAAAAACACAAGGGCAATATTTCTATCAAGGAGCTCAGTGACATGACAGCCATTAAGGCAGAGGATATATTGACTACTCTTCAAAGCCTAGAATTGATTCAGTACCGGAAAGGCCAGCATGTCATCTGTGCTGATCCCAAGGTCTTAGATCGGCATCTGAAAGCTGCTGGCCGGGGTGGTTTAGAGGTTGATGTTAGCAAATTGATCTGGACTCCTTACAAAGAACAAGGTTGA 1320 0.4447 MGSIDAPTFTQNGSDATVAADGPPPPVPDSAIMTMEKTLEADSSRKRRFGILPLEVGTRVMCRWRDGKYHPVKVIERRKMHIGGVNDYEYYVHYTEFNRRLDEWVKLEQLDLESVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDSLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0367 439 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 164 435 IPR016181 -
Vvi18g0367 439 Gene3D - 46 163 - -
Vvi18g0367 439 MobiDBLite consensus disorder prediction 1 17 - -
Vvi18g0367 439 Gene3D - 164 220 - -
Vvi18g0367 439 CDD CBD_MOF_like 57 126 - -
Vvi18g0367 439 SMART chromo_7 68 127 IPR000953 -
Vvi18g0367 439 CDD NAT_SF 275 333 - -
Vvi18g0367 439 Gene3D - 342 422 IPR036388 -
Vvi18g0367 439 FunFam Histone acetyltransferase 222 350 - -
Vvi18g0367 439 Pfam MOZ/SAS family 224 401 IPR002717 GO:0004402|GO:0006355|GO:0016573
Vvi18g0367 439 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 163 434 IPR002717 GO:0004402|GO:0006355|GO:0016573
Vvi18g0367 439 SUPERFAMILY Chromo domain-like 47 164 IPR016197 -
Vvi18g0367 439 Pfam RNA binding activity-knot of a chromodomain 54 112 IPR025995 -
Vvi18g0367 439 PANTHER HISTONE ACETYLTRANSFERASE 61 435 - -
Vvi18g0367 439 FunFam Histone acetyltransferase 342 421 - -
Vvi18g0367 439 Gene3D - 222 434 - -
Vvi18g0367 439 MobiDBLite consensus disorder prediction 1 28 - -
Vvi18g0367 439 FunFam Histone acetyltransferase 162 219 - -
Vvi18g0367 439 FunFam Histone acetyltransferase 44 163 - -
Vvi18g0367 439 Pfam MYST family zinc finger domain 165 219 IPR040706 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0367 4 439 C2H2 Transcription Factor Family AT5G64610 86.468 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0367 K11308 - vvi:100247177 882.478