Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0359 ATGGCGGCATCCGTTGATAATCGCCAGTTCTCTCGGCTGGAATCCTCACTCAACGGCGTTGTTCGCTCCTTCAAAACTGGTTCCAACCACCGTTCCGATTCGCCAGTTCGTGGCGGTGGTTGCAACTTCCCCTCCAACTCTGAATTCACTCGTCCCAAGAAATCCGTTGCAGCAGTGGAGGATGATTCCTCCAGTGACGACGAAAATGAACCCGATTGGAAAGATTTGGTTCGCAAGGGTAACAGTGAATTAGAGCCGTCCGTCTTGGACTCACGAGACGAAGGAACTGCGGATAATTGGATCCAGCGCAACCCTTCCATGGTCCGTCTCACAGGGAAACACCCCTTCAACTCGGAGGCGCCACTGAACCGACTCATGCACCATGGCTTCATCACGCCCGTCCCTCTCCACTACGTTCGCAACCACGGTGCGGTCCCCAAGGGCTCCTGGGACAACTGGACCGTGGAGGTATCTGGACTCGTCAAGCGACCCGCAAGATTCACCATGGACCAACTCGTGAACGAGTTCCCCACTCGGGAGTTTCCAGTCACACTGGTCTGCGCCGGTAACCGTCGGAAAGAGCAGAACATGGTAAAGCAAACGATTGGCTTCAACTGGGGGGCAGCCGGGGTGTCCACTTCGGTCTGGCGAGGCGTACGCTTACGCGATGTTCTGAAACGGTGCGGCATCATGAGCCGTAAGCAAGGGGGACTGAATGTGTGTTTCGAAGGCGCGGAAGATCTACCAGGTGGAGGCGGCTCCAAGTACGGAACCAGCATTAAAAATGAAATAGCGATGGATCCGTCGCGAGATATCATATTGGCTTACATGCAGAACGGTGAACGATTATTACCAGATCATGGGTTCCCAGTGAGGATGATCATTCCAGGGTTCATTGGGGGCCGTATGGTAAAATGGCTCAAACGAATCATCGTAACCACCCAAGAATCTGACAGTTATTACCATTACAAGGACAACAGAGTCCTCCCTTCACACGTCGACGCCGAGCTAGCAAACGCCGAAGCTTGGTGGTATAAGCCGGAGTACATCATTAATGAGCTGAACATTAACTCCGTCATCACTACACCATGCCACGAAGAAATCTTACCCATCAACTCCTGGACGACTCAGAGGCCCTACACGTTGAAGGGCTACGCATACTCTGGTGGGAAGAAAGTGACACGTGTGGAGGTGACGATGGACGGAGGAGAAACGTGGCAAGTGTGCAGACTGGACCACCCAGAGAAGCCCAACAAATACGGCAAGTACTGGTGCTGGTGCTTCTGGTCACTGGAGGTGGAGGTGCTGGATCTCATTGGTGCCAAAGAGATTGCAGTTCGAGCCTGGGATGAGACCCTCAACACCCAGCCCGAGAAGCTCATCTGGAACGTCATGGGAATGATGAACAACTGCTGGTTCAGAGTAAAAACAAATGTGTGCAAGCGTCACAGGGGAGAGATTGGAATCGTATTCGAGCATCCAACTCTTCCAGGAAACCAATCCGGAGGATGGATGGCTCGTGAAAAGCACCTTGTCCAATCCTCTGATGCCAACTCAACTCTGAAGAAGAGTGTCTCATCTCCTTTCATGAACACCTCCTCCAAAATGTACTCCATGTCCGAGGTCAAAAAACACAACTCAGCCGACTCCACATGGATCGTCGTCCACGGCCACGTCTACGATTGCACCCGCTTCCTCAAAGACCACCCTGGCGGTACCGACAGCATCCTCATCAATGCTGGCACCGACTGCACTGAGGAGTTCGACGCCATACACTCTGATAAAGCCAAAAAGCTTCTCGAGGACTATCGAATTGGTGAGTTGATGACCACTGGTTACACCTCCGACTCCTCTGCATCATCTCCCAACACCTCGGTACATGGGGCCTCCAACTTGACTCACCTTGCTCCTATCAAGGAAGTTACCCCATTGAGAAGCGTTGCACTCGTTCCTCGTGAGAAAATCCCATGCAAGCTCGTCTCCAAGGATTCCATCTCACATGACGTACGTCGTTTTCGATTTGCATTGCCGTCTGAAGATCAAGTTTTGGGATTACCCGTAGGAAAGCACATATTCCTTTGTGCTGCCATTGATGGTAAGCTGTGCATGCGAGCCTACACCCCGACTAGCAACATTGATGAAGTGGGCTTCTTCGAGCTTGTGGTTAAGATTTACTTCAAGGGTGTACACCCTAAATTCCCTAATGGTGGCCTCATGTCGCAGTACTTGGATTCGCTTCCGTTGGGGGCCACGCTGGACGTGAAGGGTCCACTGGGTCACATAGAATATACTGGGCGTGGTAACTTTCTTGTGCATGGCAAACCCAAGTTTGCCAAGAAGCTGGCCATGATAGCAGGCGGCAGTGGAATCACGCCTATCTATCAGATTATTCAAGCTGTGTTGAAGGATCCAGAGGATGACACTGAGATGTATGTGGTGTATGCGAATCGCACTGAAGATGATATATTGCTATGGGAGGAGCTTGATGCTTGGGCTGAAAAGCATGAGAGGTTGAAGGTGTGGTATGTGGTGGGAGAAAGCATAAGGAAGGGTTGGAAATACAGTTTGGGTTTCATCACAGAGAGTATTCTGAGGGAGCACATCCCATCTGCTTCCGGTGATACTTTGGCTCTGGCTTGTGGGCCACCGCCGATGATTCAGTTTGCAGTGCAACCCAATTTGGAAAAGTTGGGCTATGATATTAAGAATTCTTTGCTGGTGTTCTGA 2727 0.5134 MAASVDNRQFSRLESSLNGVVRSFKTGSNHRSDSPVRGGGCNFPSNSEFTRPKKSVAAVEDDSSSDDENEPDWKDLVRKGNSELEPSVLDSRDEGTADNWIQRNPSMVRLTGKHPFNSEAPLNRLMHHGFITPVPLHYVRNHGAVPKGSWDNWTVEVSGLVKRPARFTMDQLVNEFPTREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVRLRDVLKRCGIMSRKQGGLNVCFEGAEDLPGGGGSKYGTSIKNEIAMDPSRDIILAYMQNGERLLPDHGFPVRMIIPGFIGGRMVKWLKRIIVTTQESDSYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHEEILPINSWTTQRPYTLKGYAYSGGKKVTRVEVTMDGGETWQVCRLDHPEKPNKYGKYWCWCFWSLEVEVLDLIGAKEIAVRAWDETLNTQPEKLIWNVMGMMNNCWFRVKTNVCKRHRGEIGIVFEHPTLPGNQSGGWMAREKHLVQSSDANSTLKKSVSSPFMNTSSKMYSMSEVKKHNSADSTWIVVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDKAKKLLEDYRIGELMTTGYTSDSSASSPNTSVHGASNLTHLAPIKEVTPLRSVALVPREKIPCKLVSKDSISHDVRRFRFALPSEDQVLGLPVGKHIFLCAAIDGKLCMRAYTPTSNIDEVGFFELVVKIYFKGVHPKFPNGGLMSQYLDSLPLGATLDVKGPLGHIEYTGRGNFLVHGKPKFAKKLAMIAGGSGITPIYQIIQAVLKDPEDDTEMYVVYANRTEDDILLWEELDAWAEKHERLKVWYVVGESIRKGWKYSLGFITESILREHIPSASGDTLALACGPPPMIQFAVQPNLEKLGYDIKNSLLVF* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0359 908 Gene3D - 91 343 IPR036374 -
Vvi18g0359 908 FunFam Nitrate reductase 353 528 - -
Vvi18g0359 908 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 568 578 IPR001709 GO:0016491
Vvi18g0359 908 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 736 745 IPR001709 GO:0016491
Vvi18g0359 908 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 808 817 IPR001709 GO:0016491
Vvi18g0359 908 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 704 711 IPR001709 GO:0016491
Vvi18g0359 908 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 852 868 IPR001709 GO:0016491
Vvi18g0359 908 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 782 801 IPR001709 GO:0016491
Vvi18g0359 908 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 876 884 IPR001709 GO:0016491
Vvi18g0359 908 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 820 831 IPR001709 GO:0016491
Vvi18g0359 908 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 534 609 IPR001199 -
Vvi18g0359 908 Pfam Oxidoreductase molybdopterin binding domain 142 321 IPR000572 -
Vvi18g0359 908 CDD eukary_NR_Moco 93 477 - -
Vvi18g0359 908 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 159 194 IPR022407 GO:0043546
Vvi18g0359 908 Gene3D - 530 610 IPR036400 -
Vvi18g0359 908 SMART Cyt_b5_2 537 609 IPR001199 -
Vvi18g0359 908 MobiDBLite consensus disorder prediction 1 98 - -
Vvi18g0359 908 PIRSF Nitr_rd_NADH 28 907 IPR012137 GO:0006809|GO:0042128|GO:0050464
Vvi18g0359 908 Gene3D - 353 527 - -
Vvi18g0359 908 FunFam Nitrate reductase 94 343 - -
Vvi18g0359 908 CDD cyt_b5_reduct_like 657 903 - -
Vvi18g0359 908 SUPERFAMILY E set domains 353 479 IPR014756 -
Vvi18g0359 908 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 565 572 IPR018506 GO:0020037
Vvi18g0359 908 Pfam Mo-co oxidoreductase dimerisation domain 349 479 IPR005066 GO:0016491|GO:0030151
Vvi18g0359 908 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 652 764 IPR017927 GO:0016491
Vvi18g0359 908 PRINTS Cytochrome B5 reductase signature 704 711 - -
Vvi18g0359 908 PRINTS Cytochrome B5 reductase signature 683 694 - -
Vvi18g0359 908 PRINTS Cytochrome B5 reductase signature 782 801 - -
Vvi18g0359 908 PRINTS Cytochrome B5 reductase signature 749 763 - -
Vvi18g0359 908 PRINTS Cytochrome B5 reductase signature 820 831 - -
Vvi18g0359 908 PRINTS Cytochrome B5 reductase signature 876 884 - -
Vvi18g0359 908 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 532 612 IPR036400 -
Vvi18g0359 908 Gene3D - 759 908 IPR039261 -
Vvi18g0359 908 Pfam Cytochrome b5-like Heme/Steroid binding domain 539 608 IPR001199 -
Vvi18g0359 908 Pfam Oxidoreductase NAD-binding domain 783 890 IPR001433 GO:0016491
Vvi18g0359 908 PRINTS Cytochrome B5 signature 596 608 IPR001199 -
Vvi18g0359 908 PRINTS Cytochrome B5 signature 559 569 IPR001199 -
Vvi18g0359 908 PRINTS Cytochrome B5 signature 584 591 IPR001199 -
Vvi18g0359 908 PRINTS Cytochrome B5 signature 569 583 IPR001199 -
Vvi18g0359 908 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 751 902 IPR039261 -
Vvi18g0359 908 PANTHER SULFITE REDUCTASE 83 482 - -
Vvi18g0359 908 MobiDBLite consensus disorder prediction 1 52 - -
Vvi18g0359 908 MobiDBLite consensus disorder prediction 70 92 - -
Vvi18g0359 908 FunFam Nitrate reductase [NADH] 759 908 - -
Vvi18g0359 908 FunFam Nitrate reductase 530 611 - -
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 395 407 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 284 297 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 209 224 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 422 432 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 447 459 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 183 194 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 351 363 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 300 313 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 108 122 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 130 146 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 194 206 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 460 473 IPR008335 GO:0016491
Vvi18g0359 908 PRINTS Eukaryotic molybdopterin domain signature 267 283 IPR008335 GO:0016491
Vvi18g0359 908 SUPERFAMILY Riboflavin synthase domain-like 646 764 IPR017938 -
Vvi18g0359 908 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 91 351 IPR036374 -
Vvi18g0359 908 Pfam Oxidoreductase FAD-binding domain 657 763 IPR008333 -
Vvi18g0359 908 FunFam NADH-cytochrome b5 reductase 644 758 - -
Vvi18g0359 908 Gene3D Translation factors 645 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0359 Vvi-Chr18 3578203 3582184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0359 645 899 NADPH P450 reductases AT5G17770 39.147 2.26e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0359 K10534 - vvi:100264320 1853.95