Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0264 ATGGGCTGGGGTTCTCTTCACTGGCTTCAGCACTCTCCTGCTTCTTGGCCTGCAAAGTTATGGGGTGAGGAAGTTAGAAATGTTGATAGCAGTGCTGGTATTCATAATGGCTGGTTGTTTCCTTGGAGAAATGAGTTATGTGAAGCCTCCAGCCTCAGGTGTGTTATAAAGGGCATGTTCATTCCCAAGCTTAAAGGCCAGTGTGCCACCGGTGATGCCATTGCCATCTTGGGTGCTCTGGTTATGCCCCATAATCTCTTCCTCCATTCTGCTCTTGTACTCTCTAGGAAGATGCCCAATTCAGTCCGTGGCATCAATGAGGCATGTCGATATTTCTTAATAGAGAGCGTATTAGTGTTATTTGTAGCATTTTTAATCAATGTTGCAGTTGTTTCCATGTCGGACACTGTTTGTTCTGCTGACAATCTTTCAAAAGAAAACTTGGATCAATGCAATGATCTTAATCTTAATTCTGCTTCTTTCCTCCTCAAGAATGTGTTGGGAGGGTCAAGCAAGGTGGTCTATGCCATTGTGCTTTGCCTCAGGCCAAAGTTCCACCATCACAGGCACTTATGCTGGACAATATATCATGCAGGGTTTCTTGGATATTAA 612 0.4412 MGWGSLHWLQHSPASWPAKLWGEEVRNVDSSAGIHNGWLFPWRNELCEASSLRCVIKGMFIPKLKGQCATGDAIAILGALVMPHNLFLHSALVLSRKMPNSVRGINEACRYFLIESVLVLFVAFLINVAVVSMSDTVCSADNLSKENLDQCNDLNLNSASFLLKNVLGGSSKVVYAIVLCLRPKFHHHRHLCWTIYHAGFLGY* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0264 203 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 54 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vvi18g0264 203 Pfam Natural resistance-associated macrophage protein 54 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0264 Vvi-Chr18 2519567 2521025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0264 53 179 Inorganic Solute Cotransporters AT1G15960 63.780 1.08e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0264 K21398 - vvi:100266052 224.172