Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0231 ATGCACCGACGCCGTTGTACGGTATCGACATCGGCGTCTGAATCCGAAACAGAGACCGAGACGGAGCTAATGAGGTGCATATCGTGTCGGGAGGACTACGGCAGAATTGACGCCGGCACGTGCAAGGAGTGCTACGAGGAAGCCAGCGAGACCGAGGAAGAGCTTAAGCGTGAGATCGAAGAACTCAAAGCCAAAGTCGCCTTTCTCCGATGTTCGTCTCCTCTCGACCACTCTCACCGCCGCTCCTTTTCCGACGTCATTTTGGTTGCTTCCAATGATGACTCCGCCGCATCGGCTGCGCCGGTTCCGGCTCATAAGTCCGTTTTGGCAAGCCGTTCCCCGGTTTTCAAAGCAATGCTTGAGAATGAGATGGAGGAAAGCCTGAGCGGCACCATCAAGATTAGCGATGTATCATATGAAGCCCTTCGCTGTTTTGTTAACTATTTATACACTGCTGAAGCATGTCTTGATGAGCCAATGGCTTGTGATCTTCTAGTATTGGCTGAAAAATATCAAGTGAAGCATCTTAAGGCATATTGCGAGAAGTTCATGGTGTCCAAATTGAACTGGGACAATTCGGTTATCAGCTTTGCTTTTGCACATCAGCACAATGCCAAACTCTTGATTGATGCAGCTTTGTCAGTAATCACCGATAACATGGACAAGCTAACTAAACGGGAGGAGTATATAGAGCTTGTGGAAAAGGATCCTCGCCTCGTTGTGGAAATCTATGAAGCTTATCTCTCAAAACAGGTCAATACTGCTGCACATAAGGATTCTTCTCTGAAGCCATGA 795 0.4818 MHRRRCTVSTSASESETETETELMRCISCREDYGRIDAGTCKECYEEASETEEELKREIEELKAKVAFLRCSSPLDHSHRRSFSDVILVASNDDSAASAAPVPAHKSVLASRSPVFKAMLENEMEESLSGTIKISDVSYEALRCFVNYLYTAEACLDEPMACDLLVLAEKYQVKHLKAYCEKFMVSKLNWDNSVISFAFAHQHNAKLLIDAALSVITDNMDKLTKREEYIELVEKDPRLVVEIYEAYLSKQVNTAAHKDSSLKP* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0231 264 CDD BTB_POZ_ZBTB_KLHL-like 83 171 - -
Vvi18g0231 264 Pfam BTB/POZ domain 80 187 IPR000210 GO:0005515
Vvi18g0231 264 SMART BTB_4 84 188 IPR000210 GO:0005515
Vvi18g0231 264 PANTHER SPECKLE-TYPE POZ PROTEIN 28 255 - -
Vvi18g0231 264 SUPERFAMILY POZ domain 80 186 IPR011333 -
Vvi18g0231 264 Coils Coil 41 72 - -
Vvi18g0231 264 Gene3D Potassium Channel Kv1.1; Chain A 53 188 IPR011333 -
Vvi18g0231 264 FunFam BTB/POZ domain-containing protein 190 263 - -
Vvi18g0231 264 Gene3D - 189 263 - -
Vvi18g0231 264 ProSiteProfiles BTB domain profile. 84 158 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vvi18g0231 BTB 1.6e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0231 K10523 - vvi:100243658 464.151