Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0200 ATGATAACATCCCTCATCCCTCATCCGAGATTAGTTCCCAAGTTTCTCTCGAGTGTGAGTTTTGCAAGAGCTCTCAGGAGAACTACTGTGATCAGACTCTGTTCACCTACAATGGAATTTTCTGGGATGGCGAAGAAAAGGACCCTGGATTTCATATTGGACACAGCGTCCGCCAACCACTCCCTCGGAAACTACCTAGAATTGCTGAAAGTGAACGGGACTTTGGTGGTTGTGGGGGCACCGGATAAGCCCATGGAGCTGCCTTCTTTCCCTTTGATTTTTGGCAAAAGAATAATAAAAGGGAGCATCTTAGGTGGGATGAAAGAGACACAGGAGATGATGGATGTGTGTGGGCAGCGCAACATAAAGTCGGATATCGAGGTGGTGAAGACAGACCAGATCAACCAGGCACTGGATAGGCTTTCTAGGAATGATGTTCGGTATCGTTTTGTAATTGACATTGCCGGCAAGTCTGCAAAGATGTAG 486 0.4691 MITSLIPHPRLVPKFLSSVSFARALRRTTVIRLCSPTMEFSGMAKKRTLDFILDTASANHSLGNYLELLKVNGTLVVVGAPDKPMELPSFPLIFGKRIIKGSILGGMKETQEMMDVCGQRNIKSDIEVVKTDQINQALDRLSRNDVRYRFVIDIAGKSAKM* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0200 161 Gene3D - 43 124 - -
Vvi18g0200 161 Gene3D - 125 154 - -
Vvi18g0200 161 PANTHER ALDEHYDE REDUCTASE 44 156 IPR047109 GO:0016616
Vvi18g0200 161 FunFam Putative cinnamyl alcohol dehydrogenase 6 43 124 - -
Vvi18g0200 161 Pfam Zinc-binding dehydrogenase 40 116 IPR013149 -
Vvi18g0200 161 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 21 123 IPR036291 -
Vvi18g0200 161 FunFam Putative cinnamyl alcohol dehydrogenase 6 125 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0200 Vvi-Chr18 1784960 1786659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0200 48 155 Monolignol Biosynthesis Gene Families AT2G21730 56.481 5.12e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0200 K00083 - vvi:100262607 192.586