Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0165 ATGGCGACGCCTGTGAAAGTGTACGGACCACCCATGTCCACCGCTGTATCTAGAGTTTTGGCCTGCCTCCTGGAGAAAGACGTGAACTTCCAACTCATCCCCGTCGACATGTCCAAAGGCGAACACAAGAAACCAGATTACCTCAAAATTCAGCCCTTCGGCCAAGTCCCATCTTTCCAAGACGAGAGCATCTCCCTCTTTGAGTCCAGAGCCATATGTCGGTACGTATCGGAGAAGTACGCAAACCAGGGGAACAAGCGCTTATACGGGACAAACCCACTAGAGAAAGCTTCCATAGAACAGTGGCTTGAAGCGGAAGGGCAAAGCTTCAACCCACCAAGCTCAGCTCTGGTGTTTCAGCTGGCGTTCGCGCCCCGAATGAAGCTGAAACAAGACTTGGGTGTGATCAAGCAGAGCGAGGAGAAGCTGGCTAAGGTTCTCGACGTGTACGAGCAGAGGCTCGGCGAGAGCCGTTTCTTGGCCGGCGATGAGTTCACACTGGCTGATCTTTCTCACCTGCCTAATACGCAGTACCTGGTGAGTGTTACCGAGAAGGGAGAGATGTTTACGAAGAGGAAGAATGTGGGTCGGTGGTGGAGTGAGATATCGGGAAGAGATTCGTGGAAGAAAGTGGTTGATTTGCAGAAAGCGCCGCCTCCCAAGAGCGCCTGA 672 0.5298 MATPVKVYGPPMSTAVSRVLACLLEKDVNFQLIPVDMSKGEHKKPDYLKIQPFGQVPSFQDESISLFESRAICRYVSEKYANQGNKRLYGTNPLEKASIEQWLEAEGQSFNPPSSALVFQLAFAPRMKLKQDLGVIKQSEEKLAKVLDVYEQRLGESRFLAGDEFTLADLSHLPNTQYLVSVTEKGEMFTKRKNVGRWWSEISGRDSWKKVVDLQKAPPPKSA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0165 223 CDD GST_N_Phi 4 79 - -
Vvi18g0165 223 Gene3D - 91 212 - -
Vvi18g0165 223 FunFam Glutathione S-transferase F2 4 88 - -
Vvi18g0165 223 SUPERFAMILY GST C-terminal domain-like 85 213 IPR036282 -
Vvi18g0165 223 FunFam Glutathione S-transferase F2 90 212 - -
Vvi18g0165 223 CDD GST_C_Phi 94 212 IPR034347 -
Vvi18g0165 223 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 214 - -
Vvi18g0165 223 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Vvi18g0165 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 220 IPR010987 -
Vvi18g0165 223 Pfam Glutathione S-transferase, C-terminal domain 130 206 IPR004046 -
Vvi18g0165 223 SUPERFAMILY Thioredoxin-like 4 84 IPR036249 -
Vvi18g0165 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Vvi18g0165 223 Gene3D Glutaredoxin 2 90 - -
Vvi18g0165 223 SFLD Glutathione Transferase (cytosolic) 4 216 IPR040079 -
Vvi18g0165 223 SFLD Main.5: Phi-like 4 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0165 Vvi-Chr18 1461375 1462209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0165 7 216 Glutathione S-transferase Gene Family AT2G47730 48.571 5.09e-68 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0165 K00799 - vvi:100260869 449.514