Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0147 ATGGAAGTTACAATCATCTCCAGAGAAACCATTAAGCCTTCTTCACCAACACCCCATCACCTCAGGGCCTTCAAGCTCTCCCTCTTGGATCAGCTCGTTCCTTGTTGCTACACCCAAGTCCTCCTTTTCTATCTCATCGACGGCTTCCATGGCCAATCAATCGAAACCTCCCATATCTCAACTAGGTTGAAGGATTCTCTATCTGAAACCCTAACTCACTTCTACCCTCTAGCTGGAAGCATCGGTGATGATGAACTTCAGATTGACTGTAATGATGAGGGTGTGCCTTACTTTGAAGCTAGAGTTGACTGCAACCTCTCAGAGTTTCTCCAAGAACCTGAGCTTGAGTTATTAAATCAATTTTTTCCTTGTGATCCTCTTAATACTCCTCCAATGGCTAAGCTTCATCTAGCTATGATCCAAGTTAACATCTTTAATCGTGGGGGAATCGCCATTGGTGTGTGCCTTTCTCATAAGATTGCCGATGGGGTCTCCATCAGTGCTTTTCTCAAAGCTTGGGCCGCAATCGCTCGGGGCTGTTTTGAGGAGTACCCCAGTTTTGAAGCAAAATCACTCTTCCCACAAAATGAATCACTCCCACAAGACTACTCCATGGTTCTAGGAAAATGCTTGATCAGAACAGGCAAATGTGTTACCAAGAGGGTTGTGTTTGATGCATCTGCCATAGCCGCCCTTAAAGCCAAAGCCTCTGTAGACTGCACCCGAGTCGAGGTGGTGTCCGCCTTCATATGGAAGCGTGCCATGGCCGCTGCCAAGCAAAAACTTGGATTCCAAAGGTCTTCCATACTCACCCACGCAGTGAACTTGAGGAAAAAAACCATCCTATCGTTGCCAGAATCCTCCATGGGAAACCTCTTCTGGATAGCAATCACAGAAGGCAGGGTTGATGATGAAGCTGAACTGGACCTCTTGGTTGATAAAACAAGAAAGGCTATATCAAAAATCAGCTGCGATTTTGCGAAGAAGCTACAGGGTGAAGAAGGCTTTGCAGTGGCTTTTGAACATGTTAAAGAGGTAAAAGCAGCGTTTGAGGAAGATGGAGTGGACTTCTATGGGTTCAGCAGTTGGTGCAAATTTGAAGTGTATGAGGGTGATTTTGGATGGGGAAGGCCTATATGGGTGAGTAGTTTCAGTGGAAAAGGATCAGTGTACAAGAATTTGATTTTTTTCATGGACACTAGATGTGGAAATGGGATTGAAGAATGGGTGACTTTGGATGAAGAGGAGTTGGGGATTTTGGAATGTGATCCTGAGTTTCTTTCATTTGGGTCCATGGATCCCAGTCCTTTGAAGTTGGCTCATTTTGGGCAAGTTTGA 1338 0.4522 MEVTIISRETIKPSSPTPHHLRAFKLSLLDQLVPCCYTQVLLFYLIDGFHGQSIETSHISTRLKDSLSETLTHFYPLAGSIGDDELQIDCNDEGVPYFEARVDCNLSEFLQEPELELLNQFFPCDPLNTPPMAKLHLAMIQVNIFNRGGIAIGVCLSHKIADGVSISAFLKAWAAIARGCFEEYPSFEAKSLFPQNESLPQDYSMVLGKCLIRTGKCVTKRVVFDASAIAALKAKASVDCTRVEVVSAFIWKRAMAAAKQKLGFQRSSILTHAVNLRKKTILSLPESSMGNLFWIAITEGRVDDEAELDLLVDKTRKAISKISCDFAKKLQGEEGFAVAFEHVKEVKAAFEEDGVDFYGFSSWCKFEVYEGDFGWGRPIWVSSFSGKGSVYKNLIFFMDTRCGNGIEEWVTLDEEELGILECDPEFLSFGSMDPSPLKLAHFGQV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0147 445 Gene3D - 1 206 IPR023213 -
Vvi18g0147 445 PANTHER F21J9.9 4 429 - -
Vvi18g0147 445 Gene3D - 215 427 IPR023213 -
Vvi18g0147 445 Pfam Transferase family 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0147 Vvi-Chr18 1343783 1345120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0147 1 421 Monolignol Biosynthesis Gene Families AT5G48930 25.612 5.48e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0147 - - vvi:100264373 891.723