Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0116 ATGGGATTCCCACTCATTGGAGAGACCATCCAGTTTTTCATCCCAAGCAAGTCCTTGGACGTTTCGAGTTTCATCAAGAAGAGGATGAAAAAATACGGTCCATTGTTCTGTACAAACTTGGCAGGACGACCGGTGGTGGTGTCGTCGGACCCAGACTTCAACTACTATATATTCCAACAAGAAGGGAAGTTGGTGGAGTTATGGTACATGGACTCCTTTGCAAGGCTTGTCGGCCTGGATCCTTCACAGTCTATTACTTCAACTGGTTATATTCACAAGTATGTTAAGAACTTGGCGTTGGCTCATATTGGTACCGAGGCCCTGAAAGACGGACTCCTTTCGAAGGCTGAAGATATGATACGTACAAGGCTGCATGATTGGTCCAAGTTGCCTGCCTTCGAATTCAAAGCATGCGTTTCATCGATGATATTTGATTTTACTGCAACCTCGTTGTTTGGTTATGACTTCAAGATGAAAGGAGCACATTTTAGTGAAAAATTTACAAACATCGTACATGCTCTTATTGCATTTCCTTTGAATATCCCGGGTACAACTTTCCATAAATGTCTAAAGGACCAAAAGGAGGCAATGAAGTTGATTCGTGATGTATTAAAAGAGAAAAAAGCTTCATCTAAAACACTTGAAGGAGATTTTCTTGATCAGATGGTTGATGATATGAAGAACGAAAAGTTCCTATCGGATGACTTTGTCGTTTTTGTTGTGTTCGGGTTTCTACTTGCTAGTTTTGAGACAATTTCCTCTACTTTAACCTTAGCTATTAAGTTACTCATAGAACACCCTTTAGTAATGCAAGAACTAATTGAGGAGCATGAGGCAATCCTTAAAAATAGGGAAGATCCAAATTCTGGAATTTCATGGAAGGAATATAAGTCAATGACTTTTACTCATCAAGTTATCAATGAAGCTCTTAGGTTAGGCAGTGTTGCTCCAGGGATTTTGAGAAGGGCAATAAAAGACATTCAAGTAAATGGATATACGATTCCAGCAGGCTGGACAATCATGGTTGTTCCCGCAGCTCTTCAACTAAATCCTAATACTTTTGTTGATCCCCTTGCTTTCAATCCATGGCGGTGGAAGGATATGGGAGTTGGTGTTGTAGCAAAGAATTTCATACCATTTGGAGGTGGATCGAGATTATGTGTAGGAGCAGAGTTTACTAAGGTTCTAATGACAACATTTTTCCATGTCTTGGTCACTAATTATAGGTTGACGAAGATCAAAGGAGGACAGATAGCTCGATCTCCAGCTTTGACATTTGGAAATGGTTTACATATCAACATTTCAAAAAAGCATCAATGA 1320 0.3985 MGFPLIGETIQFFIPSKSLDVSSFIKKRMKKYGPLFCTNLAGRPVVVSSDPDFNYYIFQQEGKLVELWYMDSFARLVGLDPSQSITSTGYIHKYVKNLALAHIGTEALKDGLLSKAEDMIRTRLHDWSKLPAFEFKACVSSMIFDFTATSLFGYDFKMKGAHFSEKFTNIVHALIAFPLNIPGTTFHKCLKDQKEAMKLIRDVLKEKKASSKTLEGDFLDQMVDDMKNEKFLSDDFVVFVVFGFLLASFETISSTLTLAIKLLIEHPLVMQELIEEHEAILKNREDPNSGISWKEYKSMTFTHQVINEALRLGSVAPGILRRAIKDIQVNGYTIPAGWTIMVVPAALQLNPNTFVDPLAFNPWRWKDMGVGVVAKNFIPFGGGSRLCVGAEFTKVLMTTFFHVLVTNYRLTKIKGGQIARSPALTFGNGLHINISKKHQ* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0116 439 SUPERFAMILY Cytochrome P450 2 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 Pfam Cytochrome P450 18 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS P450 superfamily signature 378 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 FunFam Cytochrome P450 family protein 1 436 - -
Vvi18g0116 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 380 389 IPR017972 GO:0005506|GO:0016705
Vvi18g0116 439 Gene3D Cytochrome P450 1 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS E-class P450 group I signature 236 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS E-class P450 group I signature 343 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS E-class P450 group I signature 256 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS E-class P450 group I signature 387 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS E-class P450 group I signature 303 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 PRINTS E-class P450 group I signature 377 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0116 439 CDD CYP90-like 28 436 - -
Vvi18g0116 439 PANTHER CYTOCHROME P450 26 1 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0116 Vvi-Chr18 1054808 1057574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0116 1 438 Cytochrome P450 AT1G12740 46.292 4.61e-148 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0116 - - vvi:100244431 865.144