Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0115 ATGTACTGGTCTGTTTGGCTCTGTGTTGTAAGCTTGTTTATAGCAAGCATAACTCACTGGGTTTACAAATGGAGGAATCCTAAATGCAATGGCAAACTCCCTCCAGGTTCAATGGGATTCCCAATCATTGGAGAGACCATCCAGTTTTTCATCCCAAGCAAGTCGTTGGACGTTTCGAGTTTCATCAAGAAGAGGATGAAAAAATACGGTCCATTGTTCTGTACAAATTTGGCAGGACGACCGGTGGTGGTGTCATCGGACCCAGACTTCAACTACTATATATTCCAACAAGAAGGGAAGTTGGTGGAGTTATGGTACATGGACTCCATTGCAAAGCTTGTCGGCCTGGATACTTCACAGTCTATTGCTGCAACTGGTTATGTTCACAAGTATCTTAGGAACTTGGCGTTGGCTCATTTTGGTACCGAGGCCCTGAAAGGCAGACTCCTTGCCAAGGCTGAAGATATGATACGTACAAGGCTACATGATTGGTCCAAGTTGCCTGCCTTGGAATTCAAATCATGCGTTTCATCGATGATATTTGATTTTACTGCAACCATATTGTTTGGTTATGACTTCGAGACGAAGGGAGCACATTTTAGTGAAAAATTTACCAACATCATACATGTTCTTATGTCATTTCCTTTGAATATCCCGGGTACAACTTTCCATAAATGTCTAAAGGACCAAAAGGAGATAATGAAGTTGATTCATGATGCATTAAAAGAGAAAAAAGCTTCGCCTAAAACTCTTCAAGGGGATTTTCTTGATCAGATGATTGATGATATGAAGAAAGAAAAGTTCCTATCGGATGACTTTGTCGTTTTCGTTATGTTCGGGATTCTATTTGCTAGTTTTGAGACAATTTCCTCTACTTTAACCTTAGCTATTAAGTTACTCATAGAACACCCCTTAGTAATGCAACAACTAATTGAGGAGCATGAGGCAATCCTTAAAAATAGGGAAGATCCAAATTCTGGAATTTCATGGAAGGAATATAAGTCAATGACTTTTACTCATCAAGTTATCAATGAAGTTCTTAGGTTAGGAAGTGTTGCTCCAGGGATTTTGAGAAGGGCAATAAAAGACATTCAAGTAAATGGATATACAATTCCAGCAGGCTGGACAATCATGGTTGTTCCTGCAGCTCTTCAACTAAACCCTGATACTTTTGTTGATCCCCTTACTTTCAATCCATGGCGGTGGAAGGATATGGGAGTTGGTGTTGTAGCAAAGAATTTCATACCATTTGGAGGTGGATCAAGATTATGCATAGGAGCAGAGTTTGCTAAGGTTCTAATGACAACATTTTTCCATGTTTTGGTCACTAATTACAGGTTGACGAAGATCAAGGAAGGACAGATAGCTCGATCTCCAGTTTTGACATTTGGAAATGGTTTACATATCAACATTTCAAAAAAGCATGGATGA 1431 0.3962 MYWSVWLCVVSLFIASITHWVYKWRNPKCNGKLPPGSMGFPIIGETIQFFIPSKSLDVSSFIKKRMKKYGPLFCTNLAGRPVVVSSDPDFNYYIFQQEGKLVELWYMDSIAKLVGLDTSQSIAATGYVHKYLRNLALAHFGTEALKGRLLAKAEDMIRTRLHDWSKLPALEFKSCVSSMIFDFTATILFGYDFETKGAHFSEKFTNIIHVLMSFPLNIPGTTFHKCLKDQKEIMKLIHDALKEKKASPKTLQGDFLDQMIDDMKKEKFLSDDFVVFVMFGILFASFETISSTLTLAIKLLIEHPLVMQQLIEEHEAILKNREDPNSGISWKEYKSMTFTHQVINEVLRLGSVAPGILRRAIKDIQVNGYTIPAGWTIMVVPAALQLNPDTFVDPLTFNPWRWKDMGVGVVAKNFIPFGGGSRLCIGAEFAKVLMTTFFHVLVTNYRLTKIKEGQIARSPVLTFGNGLHINISKKHG* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0115 476 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 FunFam Cytochrome P450 family protein 25 473 - -
Vvi18g0115 476 SUPERFAMILY Cytochrome P450 30 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 CDD CYP90-like 65 473 - -
Vvi18g0115 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Vvi18g0115 476 PANTHER CYTOCHROME P450 26 32 448 - -
Vvi18g0115 476 Gene3D Cytochrome P450 25 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0115 476 Pfam Cytochrome P450 34 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0115 Vvi-Chr18 1039533 1042444 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0115 3 475 Cytochrome P450 AT1G12740 48.125 1.32e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0115 - - vvi:100261556 968.763