Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0113 ATGTGCCGGTCTGTTTGGCTCGGTGTTGTAACCTTGTTTATAGCCGGCATAACTCACTGGGTTTACAAATGGAGGAATCCCAAATGTAATGGCAAACTCCCTCCGGGTTCCATGGGATTGCCACTCATTGGAGAGACCATCCAGTTTTTCATCCCAAGCAAGTCCTTGGACGTTCCGAACTTCATCAAGAAGAGGATGAAAAAATACGGTCCATTGTTCTGTACAAACTTGGTAGGACGACCGGTGGTGGTGTCATCGGACCCAGACTTCAACTACTATATATTCCAACAAGAAGGGAAGTTGGTGGAGTTTTGGTACTTGGACTCCTTTGCAAAGCTTGTGGGTCTGGATCCTTCATCTAATGCTGCGACTGGTTATGTTCACAAGTATGCTAGGAACTTGATCTTGGCTTATTTGGGTACGGAGGTCCTGAAGGACAAACTTCTTTCCAAGGCTGAAGATCTGATACGTACAAGGCTGCATGATTGGTCCAAGTTGCCTGCCTTTGAAATCAAAGCATGCCTTTCGTCGATGGTATTTGATTTGACTGGGATGGAGGTACTTAGTGATGACTTTAAGAAGATGGGAGCACATTTTATTGAAAAATTTGCCAATATCTTACAAGCTCTTTTTTCATTTCCTTTGAATATCCCGGGTACTTCTTTCCATGAGTGCCTAAAGAATCAAAAGGAGGCAAAAAGGTTGATCCGTGATCTACTGATAGAGAGAAAAGTTACGTTAGAAAGTTGTAAAGGAGATCTTCTTGATAAGTTGGTTGACGATGCGAAGAAAGAAAAGTTCTTATCAGATGACTATATCGTTATCTTTGTGTTTGGGATTTTACTTGCTAGTTTTGAGACAATTTCCACTGCCACAACGTTAGCTCTGAAGTTCCTCACTGAACATCCTTTGGCAATGCAAGAGCTAATTGAGGAGCATGAGGCAATCCTCAAAAATAAGGAAAATCCAAATTCTGGAATTTCATGGAAGGAATATAAGTCAATGACTTTTACTCATCAAGTTATCAATGAAACTCTTCGATTAGCAAATATTGTTCCAGGGATTTTGAGAAGGGCAATAAAAGACATTCAAGTAAATGGATATACAATTCCAGCAGGCTGGATAATCCTGCTTTATCCTGCAGCTCTTCAACTAGACCCTAATACTTTTGCTGATCCCCTTACTTTCAATCCATGGCGATGGAAGGATATCGGAGCTGGTGTTAGGGCAAAGAATTTCATGCCATTCGGATGTAGCTCAAGATCATGCGCAGGAGCAGAGTTCACCAAGGTTTTAATGGCAACCTTTCTCCATGTCTTGGTCACTAATTATAGGTTGACAAAGATCAAAGGAGGAAAGATAGCTCGGTCTCCCAGTTTGATATTTGAAAATGGTTTCCACATCAACATTTCGAAAAAGCATGGATGTTGA 1431 0.413 MCRSVWLGVVTLFIAGITHWVYKWRNPKCNGKLPPGSMGLPLIGETIQFFIPSKSLDVPNFIKKRMKKYGPLFCTNLVGRPVVVSSDPDFNYYIFQQEGKLVEFWYLDSFAKLVGLDPSSNAATGYVHKYARNLILAYLGTEVLKDKLLSKAEDLIRTRLHDWSKLPAFEIKACLSSMVFDLTGMEVLSDDFKKMGAHFIEKFANILQALFSFPLNIPGTSFHECLKNQKEAKRLIRDLLIERKVTLESCKGDLLDKLVDDAKKEKFLSDDYIVIFVFGILLASFETISTATTLALKFLTEHPLAMQELIEEHEAILKNKENPNSGISWKEYKSMTFTHQVINETLRLANIVPGILRRAIKDIQVNGYTIPAGWIILLYPAALQLDPNTFADPLTFNPWRWKDIGAGVRAKNFMPFGCSSRSCAGAEFTKVLMATFLHVLVTNYRLTKIKGGKIARSPSLIFENGFHINISKKHGC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0113 476 FunFam Cytochrome P450 family protein 25 472 - -
Vvi18g0113 476 Pfam Cytochrome P450 34 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 CDD CYP90-like 65 472 - -
Vvi18g0113 476 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 PRINTS E-class P450 group I signature 339 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 SUPERFAMILY Cytochrome P450 30 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 Gene3D Cytochrome P450 25 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g0113 476 PANTHER CYTOCHROME P450 26 32 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0113 Vvi-Chr18 1007964 1010738 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0113 10 473 Cytochrome P450 AT1G12740 47.134 2.31e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0113 - - vvi:100246174 963.755