Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0101 ATGCCATTAGTCAGAGCCCTCCATTTTCTTTCCATAATCATCCATGACCACATTGAAAAACAAGATCCATCAACTAATATGCATCCTCCACTTGCCCAAACTGGTGGAAAATCATTAGTCCGATTCCGGGCATGCAACGAGTTCTACCAAGCTGCATTACCCGAAATTCTAGAGGTCTTGACATCTGCCTGTGGAACACATGAACTGCCTTTGGCTCAAACTTGGGTCCCATGCATCCAACAAGGTAAAGGGGGTTCCCGGCACACTGATGAGAACTATGCCACTGTGGATTCTGCTTACTGTGTAGCTGATCCCCGTACCCAAGGGTTTCTCGAGGCTTGCTCTGGGCACCACCTACTGAAAGGTCAAGGCGTTGCTGGAAGAGCATTCACAACTAATGAACCGTACTTCTCAGCAGACATAGCCTCCTTTAGCAAGACTCAGTAA 447 0.4765 MPLVRALHFLSIIIHDHIEKQDPSTNMHPPLAQTGGKSLVRFRACNEFYQAALPEILEVLTSACGTHELPLAQTWVPCIQQGKGGSRHTDENYATVDSAYCVADPRTQGFLEACSGHHLLKGQGVAGRAFTTNEPYFSADIASFSKTQ* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0101 148 PANTHER PROTEIN NLP8 38 148 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0101 Vvi-Chr18 922254 925402 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0101 42 148 NLP Transcription Factor Family AT1G20640 56.757 2.63e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0101 - - vvi:100253057 191.815