Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0100 ATGTTTGGACTATGTGCTGCTGTTGCAATACGCCTGCGGAGTATTCATGTTCCTTCATCTGACTTTGTCTTGGAGTTCTTCTTACCTGTAGACTGCAGGGATGCTGAAGAACAGAAGAGGATGCTTTGTTCATTGTCCATCATCATACAGAAGGTTTGCCCGAGCCTAAGGGTTGTCACAGACAAAGAGCTGGAGGAAACTCCTTCCCTGGTTAGTGAACTGACAGTCCTCTCAGATGGTAGTCCCGCCAGGGATGAAACAGAGAAGCTGCAACATACACCCACTGAAAAATGTTCCCAAGAACAGTCATCCTGGACAGCCTGTCTCAAGGAGGCCCAACAGAGTAGCAGTATTACCCCGCCATTCCAAAAGGAAAAAGTGAGGGAGAGGTTGAGTGAGAGGTACCCCATTCCTCCTGCTTTCTGCACTGGTAGGCATGGAAAGTGCATCATTCCAAAGGAGAACAACTTCAAGCAGCCTCCTAGCAAGGAGGAAAATGTCGGGATATATCGGCGATATATCGCCGATATATCGTGTATCGGGAGGGGTCGACACGATATTTCCATAAAATCTTGGAGAGATGAATTATTGCTTTCAAAATGGGTATAA 609 0.468 MFGLCAAVAIRLRSIHVPSSDFVLEFFLPVDCRDAEEQKRMLCSLSIIIQKVCPSLRVVTDKELEETPSLVSELTVLSDGSPARDETEKLQHTPTEKCSQEQSSWTACLKEAQQSSSITPPFQKEKVRERLSERYPIPPAFCTGRHGKCIIPKENNFKQPPSKEENVGIYRRYIADISCIGRGRHDISIKSWRDELLLSKWV* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0100 202 PANTHER PROTEIN NLP8 1 123 IPR045012 GO:0003700
Vvi18g0100 202 MobiDBLite consensus disorder prediction 77 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0100 Vvi-Chr18 914534 922232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0100 1 74 NLP Transcription Factor Family AT1G76350 64.000 2.21e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0100 - - vvi:100258191 300.056