Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0046 ATGGCGGAGAAGGGCAAAGTGTGTGTAACAGGCGCAGGAGGGTACGTTGCTTCATGGGTCGTCAAGCTTCTTCTCTCCAAGGGCTACATCGTCCATGGAACCGTTAGAGAACCCAGTGATGGAAAGTACTCTCATTTGAAGAAACTTGAGAAGGCATCTGGGAACCTGAAACTCTTTAAGGCAGACTTGCTGGAGTACAACACGCTTTGTTCTGCCATTGCAGGATGCGATGGAGTGTTTCATGTCGCCAGTCCCGTCCCCCCTACCACTGTAGTACCAAATCCTGAGGTAGAACTAATGGAGCCTGCTGTGAAGGGCACACTTAATGTACTGAAGGCATGTACTGAAGCAAAAGTTAAACGGGTTGTTGTTGTGTCCTCTGGATCTGCTGTCATGAGGAATCCTAGGTGGCCCAAGGGTAAAGTGAAGGATGAGACTTGCTGGTCTGACAAAGAATATTGCCGAACAACTGAGAATTGGTATTGTCTTTCTAAAACAGAAGCAGAAACCGAGGCCTTTGAGTATGCCAAAAAAAGTGGGCTTGATGTTGTGAGAGTTTGCCCTACCCTCGTTCTAGGGCCAATCCTGCAGTCCACAATCAATGCAAGTAGTTTGGTCCTCATTAAACTTTTGAAAGAAGGATATGAGTCACTGGAAAACAAGCATCGTATGATAGTAGACGCACGTGATGTAGCTGAAGCTCTGCTTCTTGCTTATGAGCAGCCCGAAGCTGAAGGAAGATACATATGCACAGCACACATGATCAAGATGCAGGATTTGGTGGAGAATTTAAGGAGCATTTACCCCTATTACAATTATCCAAAGAATTTTACAGAGGGAGAGGAAACAGAGAACCTGAGCTCAGAGAAACTGCAGAGATTGGGATGGAATTACAGGCCACTGGAAGAAACCCTAGTTGACTCGATCAAAAGCTACAAAGAGGCTGGCATCTTGGATTAA 960 0.4594 MAEKGKVCVTGAGGYVASWVVKLLLSKGYIVHGTVREPSDGKYSHLKKLEKASGNLKLFKADLLEYNTLCSAIAGCDGVFHVASPVPPTTVVPNPEVELMEPAVKGTLNVLKACTEAKVKRVVVVSSGSAVMRNPRWPKGKVKDETCWSDKEYCRTTENWYCLSKTEAETEAFEYAKKSGLDVVRVCPTLVLGPILQSTINASSLVLIKLLKEGYESLENKHRMIVDARDVAEALLLAYEQPEAEGRYICTAHMIKMQDLVENLRSIYPYYNYPKNFTEGEETENLSSEKLQRLGWNYRPLEETLVDSIKSYKEAGILD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0046 319 CDD FR_SDR_e 7 296 - -
Vvi18g0046 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 308 - -
Vvi18g0046 319 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 319 - -
Vvi18g0046 319 Gene3D - 1 319 - -
Vvi18g0046 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 313 IPR036291 -
Vvi18g0046 319 Pfam NAD dependent epimerase/dehydratase family 7 245 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0046 Vvi-Chr18 515004 519747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0046 3 319 Monolignol Biosynthesis Gene Families AT2G33590 68.553 4.87e-157 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0046 - - vvi:100253060 622.854