Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0045 ATGGAAGGGAAGGCAGAGAAGGAGAGAGTGTGCGTGACTGGTGCAGGAGGGTATATAGCTTCGTGGGTCGTCAAGTTTCTCCTCTCAAAGGGTTATATTGTTCATGGAACGGTCAGAGACCCAAGTGATGAAAAGAACAGCCATCTAAAGAAATTGGAGAAGGCTTTGGAAAATCTTCAACTTTTTAAGACAGATTTGCTGGACTATGAAGGCCTTTGCGCTGCCTTTGCTGGATGCTCTGGGGTTTTCCATGTTGCCAGCCCAGTCCCTATTGGCCCAATATCTAACCCTGAGGTGGAACTGATTGAACCAGCTGTAGTGGGCACGCGTAATGTCTTAAGCGCATGTGAGAAGGCCAAAGTGAAGAAAGTTGTGGTTGTTTCATCCGCTGGTGCTGTCGCCATGACCCCCAACAGGCCTAAGGATCGGCCCATGGACGAAGAATGTTGGTCTGACCTTGAATATTGCAAGGCAACTCAGAATTATTATTGCCTTGCCAAAACAATAGCAGAGAGTGAAGCCCTGGAGCATACAAAGAAAAGCGAGCTCAACATTGTAACAGTTTGTCCATCCTTTGTATTCGGGCCAATGCTGCAATCCACAATGAATGGCAGCTGCTTGCTTCTCCTATCATTTATGAAAGATGGTGGCGAATCAGTGAAAAATATTGTTTATCCTGTTGTTGATGTGCGCGATGTGGCTGAATCAATTCTGCTGGCATATGAGAACCCTAATGCAGTGGGAAGATACATATGCTCAGCACACTCAATCCAAGCTCAAGCTTTAGCAGAGAAGTTGAAGGGCATGTATCCCAACTACAACTACCCTAAAAGTTACATTGAAGATGAGAAGGATGTTGAGTTAAGTTCAGAGAAGTTGCAGAGGCTGGGGTGGAAGTATAGGCCGTTGGAAGAGACACTTGTGGATGCAGTTAGAAACTATGAAGAGAATGGCTTCTTGGTTGAACACTAG 972 0.4568 MEGKAEKERVCVTGAGGYIASWVVKFLLSKGYIVHGTVRDPSDEKNSHLKKLEKALENLQLFKTDLLDYEGLCAAFAGCSGVFHVASPVPIGPISNPEVELIEPAVVGTRNVLSACEKAKVKKVVVVSSAGAVAMTPNRPKDRPMDEECWSDLEYCKATQNYYCLAKTIAESEALEHTKKSELNIVTVCPSFVFGPMLQSTMNGSCLLLLSFMKDGGESVKNIVYPVVDVRDVAESILLAYENPNAVGRYICSAHSIQAQALAEKLKGMYPNYNYPKSYIEDEKDVELSSEKLQRLGWKYRPLEETLVDAVRNYEENGFLVEH* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0045 323 Gene3D - 2 323 - -
Vvi18g0045 323 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Vvi18g0045 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 315 IPR036291 -
Vvi18g0045 323 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 321 - -
Vvi18g0045 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 311 - -
Vvi18g0045 323 CDD FR_SDR_e 10 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0045 Vvi-Chr18 510563 512804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0045 7 316 Monolignol Biosynthesis Gene Families AT2G33590 60.450 1.37e-130 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0045 - - vvi:100247939 640.188