Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0044 ATGGCGGAGAAGGGCAGAGTGTGTGTGACAGGCGCAGGAGGGTACATTGCTTCATGGGTCGTTAAGCTTCTTCTCTCCAAGGGCTACATTGTCCATGGAACTGTTAGAGATCCCAGTGATGAAAAGAATGCTCATTTGAAGAAACTTGAGAAAGCATCTGAGAACCTGAAACTCTTTAAGGCAGACTTGCTGGAGTACGGAGCTCTTTGTTCTGCCTTTGAAGGATGTGATGGAGTGTTCCATACTGCCAGTCCCGTCCCCCCTACAACTGTAGCAAATCCCGAGGTAGAATTAATGGAGCCTGCTGTGAAGGGCACTCTTAATGTACTTAAGGCATGTGCTGAAGCAAAAGTTAAACGGGTTGTTGTTGTGTCCTCTGGAGCTTCTGTTATCATGAATCCTAGGTGGCCCAAGGGTAAAGTAATGGACGAGACTTGCTGGTCTGATAAAGAATATTGCCGGGCAACTAAGAATTGGTATTGTCTTTCTAAAACAGAAGCAGAAAGTGTGGCCTTTGAGTATGCGAAAACAAGTGGGCTTGATGTTGTGACGGTTTGCCCTACCCTCGTTCTAGGGCCAATCCTGCAGTCCACTATCAATGCAAGTAGTTTGGTCCTCATTAAAATTTTGAAAGAAGGATACGAGACACTGGAAAACAAGTTTCGGATGATTGTAGATGTACGCGATGTTGCTGATGCTCTACTTATCACATATGAGAAGCCTGAAGCTGAAGGAAGATACATATGCACAGCACACATGATCAAGGCGCGGGATTTGGTGGAGAAGCTAAGGAGCATTTATCCCAACTACAATTATCCGAAGAATTTTACAGAGGTAGAGGAAGTGGAAAATCTGAGCTCAGAGAAACTGCAGAAGTTGGGATGGAGTTACAGGCCCCTGGAAGAATCCCTAGTCGACTCCATCAAAAGCTACAAGGAGGCTGGCATCTTGGATTAG 957 0.4556 MAEKGRVCVTGAGGYIASWVVKLLLSKGYIVHGTVRDPSDEKNAHLKKLEKASENLKLFKADLLEYGALCSAFEGCDGVFHTASPVPPTTVANPEVELMEPAVKGTLNVLKACAEAKVKRVVVVSSGASVIMNPRWPKGKVMDETCWSDKEYCRATKNWYCLSKTEAESVAFEYAKTSGLDVVTVCPTLVLGPILQSTINASSLVLIKILKEGYETLENKFRMIVDVRDVADALLITYEKPEAEGRYICTAHMIKARDLVEKLRSIYPNYNYPKNFTEVEEVENLSSEKLQKLGWSYRPLEESLVDSIKSYKEAGILD* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0044 318 Pfam NAD dependent epimerase/dehydratase family 7 244 IPR001509 -
Vvi18g0044 318 Gene3D - 1 318 - -
Vvi18g0044 318 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 318 - -
Vvi18g0044 318 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 307 - -
Vvi18g0044 318 CDD FR_SDR_e 7 295 - -
Vvi18g0044 318 Coils Coil 42 62 - -
Vvi18g0044 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 312 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0044 Vvi-Chr18 505256 507788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0044 3 318 Monolignol Biosynthesis Gene Families AT2G33590 68.770 1.83e-158 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0044 - - vvi:100242793 638.647