Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0036 ATGGACGATTTGGAAATTGGGGAGGATGGAATCATCGATTGGGAACAAATGTTCAGTGAATTACCGGAGGATTTGGAAGTCTTAATCGGTGATCCTCCCCTCGTTTCCGATTCACCTCCCGATGTTTTATCGGATTCTTCTCCAGATTCGGTTTCTTCCTGGATCGGTGAGATCGAGAATTTGTTGATGAGAGACGACAACGACGAGGTCGTTGTTGAGCATAATCAGGATTTTGGCGAGGATTTCTTGGCAGGTTTTGTTCTTGATCATCCTGCAGATGCCTATGCCGATGCCCATGCTGACGCTTCCAGCGATAAGGATTCTACTGTTCTTGATTCTGCTGGCGAAGCTGATGCATCCACTGACAAAAATTCGAATGTTTGCGGCGATGGTAGTCCCGAGCAGGAAAAGATCAACGGCTATAACGGAAACGCCCAGAACGACGGGGAGGATGAAGATCAGGCCTCTAAGAAACGAAGAAGGCAGTTGAGAAATCGGGATGCTGCAGTGAGATCAAGGGAGAGGAAAAAGACGTATGTGAGAGATTTGGAGTTGAAGAGTAGGTATCTTGAATCGGAATGCAGAAGGCTGGGGCATTTGCTCCAGTGCTGTTTTGCAGAGAATCAAACTCTACGTCTTCACTTGCAGAATGAGAAGGCCTTTGGTGCTTCAGTGACCAAGCAGGAGTCTGCTGTGCTCTTGATGGAATCCCTGCTGTTGGGTTCCCTGCTTTGGTTCCTGGGCATCATGTGTCTAGCTCTGTCTCTTCCCGTACAGTTCCAGTTAAGTCGGGAAGCCGTTCCGATGGGAAGCGTGGAAGACAAAGGCCAGAAAAGTGTGGCTCCAAGAGGGCCAGGAAGTAAAATTTTTGAATTATGGTTGTTACAGTCTTATGTCAAGAGTAAGAGATGCAAAGCTTCAAAAACAAAGATGAAACCAGGTTCTCTTGCTCATGGAGTTTTGGTGTGA 969 0.4716 MDDLEIGEDGIIDWEQMFSELPEDLEVLIGDPPLVSDSPPDVLSDSSPDSVSSWIGEIENLLMRDDNDEVVVEHNQDFGEDFLAGFVLDHPADAYADAHADASSDKDSTVLDSAGEADASTDKNSNVCGDGSPEQEKINGYNGNAQNDGEDEDQASKKRRRQLRNRDAAVRSRERKKTYVRDLELKSRYLESECRRLGHLLQCCFAENQTLRLHLQNEKAFGASVTKQESAVLLMESLLLGSLLWFLGIMCLALSLPVQFQLSREAVPMGSVEDKGQKSVAPRGPGSKIFELWLLQSYVKSKRCKASKTKMKPGSLAHGVLV* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0036 322 MobiDBLite consensus disorder prediction 107 149 - -
Vvi18g0036 322 Gene3D - 155 221 - -
Vvi18g0036 322 SMART brlzneu 150 217 IPR004827 GO:0003700|GO:0006355
Vvi18g0036 322 MobiDBLite consensus disorder prediction 31 50 - -
Vvi18g0036 322 SUPERFAMILY Leucine zipper domain 157 215 IPR046347 GO:0003700|GO:0006355
Vvi18g0036 322 MobiDBLite consensus disorder prediction 98 173 - -
Vvi18g0036 322 CDD bZIP_HY5-like 158 209 - -
Vvi18g0036 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 160 175 IPR004827 GO:0003700|GO:0006355
Vvi18g0036 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 155 197 IPR004827 GO:0003700|GO:0006355
Vvi18g0036 322 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 11 293 - -
Vvi18g0036 322 Pfam Basic region leucine zipper 156 205 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0036 32 232 bZIP Transcription Factor Family AT1G42990 46.411 1.65e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi18g0036 bZIP_2 3.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0036 - - vvi:100244512 573.933