Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0031 ATGGCCTCCACAAACGCATCTGTTGTCTTCTCCGGAAGCAAAGCAGTCACATCCCATGAAGAAGAACATCCAGTGAAGGCCTTTGGGTGGGCAGCTAGAGACAACTCTGGCCATCTCTCTCCCTTCAACTTCTCCAGAAGGTCCACAGGAGAGGAGGACGTGAGACTTAAAGTGCTCTACTGTGGTATATGTCACACTGATCTTCACAACAGCAAGAACGAATGGGGCTCCGCCAGTTACCCTCTTGTGCCAGGGCACGAGGTCGTAGGAACTGTGACAGAAGTTGGAAGCAAGGTGAAGAAATTCAAAGTTGGAGATAAAGTAGGCGTGGGGTCCTTGGTTGGAGCATGCCACTCCTGCGACGACTGCTCTCATGACCTCGAGAACTACTGCCCCAAATTGATACTAACGTATGGTTCTCTGTACCATGATGGAACCATGACATATGGCGGTTACTCCGACACCATGGTGGCCAATGAGCGCTATGTGATTCGTATCCCCGATAACATGCCGCTTGACAAGGGAGCACCGCTCCTGTGTGCGGGGATCACAGTCTATAGTCCCTTAAAATATTATGGACTCAATGAACCAGGTATGCACATCGGGATAGTTGGGCTAGGTGGGCTTGGTCATATCGCTGTCAAATTTGCCAAGGCTTTTGGATGTAAAGTCACGGTAATTAGCACATCCCCTGCAAAGAAGAAAGAAGCCATTGAACATCTTGGTGCAGACATGTTTCTGGTCAGCCGTGATGAACAACAAATGCAGGGTGCAATGGGCACAATGGATGGTATAATTGACACGGTCTCTGCAATTCATCCTCTCCTTCCGTTGATCGACCTTTTGAAGTCCCAAGGAAAGCTTGTTATGTTGGGGGCACCAGATCAGCCACTTGAGCTTCCCGCCTTTCCTTTAATTTTGGGAAGGAAGAGTGTGGGTGGTAGTCTCACCGGAGGATTGAAGGAGACGCAAGAGATGATTGATTTTGCTGCAAAACACGATATAAAGTCGGATATTGAGGTAATTTCCATGGACTACATCAACACTGCAATGGAGCGTCTTGCCAAGGGTGATGTCAGATACCGGTTTGTCATCGACATTGGAAATACCCTTGCTGCTTCCAACCCTTAA 1131 0.4854 MASTNASVVFSGSKAVTSHEEEHPVKAFGWAARDNSGHLSPFNFSRRSTGEEDVRLKVLYCGICHTDLHNSKNEWGSASYPLVPGHEVVGTVTEVGSKVKKFKVGDKVGVGSLVGACHSCDDCSHDLENYCPKLILTYGSLYHDGTMTYGGYSDTMVANERYVIRIPDNMPLDKGAPLLCAGITVYSPLKYYGLNEPGMHIGIVGLGGLGHIAVKFAKAFGCKVTVISTSPAKKKEAIEHLGADMFLVSRDEQQMQGAMGTMDGIIDTVSAIHPLLPLIDLLKSQGKLVMLGAPDQPLELPAFPLILGRKSVGGSLTGGLKETQEMIDFAAKHDIKSDIEVISMDYINTAMERLAKGDVRYRFVIDIGNTLAASNP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0031 376 Gene3D - 30 367 - -
Vvi18g0031 376 SMART PKS_ER_names_mod 37 365 IPR020843 GO:0016491
Vvi18g0031 376 FunFam probable cinnamyl alcohol dehydrogenase 30 187 - -
Vvi18g0031 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 85 99 IPR002328 GO:0008270|GO:0016491
Vvi18g0031 376 FunFam Cinnamyl alcohol dehydrogenase 181 337 - -
Vvi18g0031 376 Pfam Alcohol dehydrogenase GroES-like domain 52 165 IPR013154 -
Vvi18g0031 376 CDD CAD1 28 366 IPR047109 GO:0016616
Vvi18g0031 376 PANTHER ALDEHYDE REDUCTASE 19 370 IPR047109 GO:0016616
Vvi18g0031 376 Gene3D - 181 337 - -
Vvi18g0031 376 SUPERFAMILY GroES-like 33 198 IPR011032 -
Vvi18g0031 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 336 IPR036291 -
Vvi18g0031 376 Pfam Zinc-binding dehydrogenase 208 331 IPR013149 -
Vvi18g0031 376 FunFam Putative cinnamyl alcohol dehydrogenase 6 338 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0031 Vvi-Chr18 393237 395443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0031 26 376 Monolignol Biosynthesis Gene Families AT4G37990 71.510 7.48e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0031 - K23232 vvi:100261642 719.924