Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0022 ATGGTGAGTTCGATTGGGCGAATGGGGAACGATCATCTGGGTCCGCCGTGGTTGAAGCCAATGCTGAGAGCTAGCTACTTCGTTCCCTGCGGTATTCATGGAGATTCTAATAAGAGCGAATGCAATATGTTTTGTTTGGATTGTATGGGAGATGCCCTCTGTTCCTACTGTTTGATCCATCACAAGGATCACTGCGTTGTTCAGATAAGACGATCCTCGTACCACAACGTGGTGAGGGTTAATGAAATTCAGAAGTACATCGACATATCTTGCGTTCAAACCTACGTTATCAACAGTGCGAAGATTGTATTTCTGAATGAGCGCCCACAGCCCAGGCCTGGAAAGGGTGTCACCAACACCTGTGAGATTTGTTGCAGAAGCCTCCTTGACTCTTTCAGGTTCTGTTCTTTGGGCTGCAAGCTTGGAGCCATGAAGCGGGGCGATCCGGACCTCACATTCTGGCTGAAACTGAAACATGGTCGTGAAACCTTCCATGGGTCCGAATCAGATGAATCATCCACACCCAGGAAGTTTCAGAGGACGCATCTTTTCAGTCGGCTGATGATAGATGGGCCAACCATTTCCCTGGATGGGCACCATGATGCTACTGTTGCTGCTGACAAGTCCACTGCGTCTAGCTCCGGAGACGAGACCATCAACAACATTTCTCCAGCAACTCCTCCCATTTTCAACCACAGCAATGCCAGGAGAAGAAAGGGTCTCCAAAGGGTTTTGACATTATATTACAGCTCCATTGACATGGATGATCTGGCATGTCCAACCCCCTAA 789 0.4854 MVSSIGRMGNDHLGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIHHKDHCVVQIRRSSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQRTHLFSRLMIDGPTISLDGHHDATVAADKSTASSSGDETINNISPATPPIFNHSNARRRKGLQRVLTLYYSSIDMDDLACPTP* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0022 262 MobiDBLite consensus disorder prediction 207 230 - -
Vvi18g0022 262 Pfam PLATZ transcription factor 70 141 IPR006734 -
Vvi18g0022 262 MobiDBLite consensus disorder prediction 207 234 - -
Vvi18g0022 262 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0022 Vvi-Chr18 319938 322101 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vvi18g0022 PLATZ 1.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0022 - - vvi:100246080 510.375