Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1145 ATGTACTTTGAAGACAATGTTGGTGTCATCGTGAACCCAAAGAGGGAAGGAAAGGGATCGACTGCTGACCAAAAGCCTTTGTCTGTGGAAACTGCTGATGGTAATTCTAATGGTATTGCAAGTGGTAGGGCTATGAAAAGGAATAATGGTTTCGCACCTGTGAAACCAACATATCAGAACTCGCCATTTAATTCAAATGATCGTGGATTGCCAGAGGGGTTCCCGTTTCTGGTTATCAGGATCCAAGATTTGCTTTTGATGGGCTACGACCTCCTCTCCCATGGTTAG 288 0.4444 MYFEDNVGVIVNPKREGKGSTADQKPLSVETADGNSNGIASGRAMKRNNGFAPVKPTYQNSPFNSNDRGLPEGFPFLVIRIQDLLLMGYDLLSHG* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1145 95 MobiDBLite consensus disorder prediction 24 43 - -
Vvi17g1145 95 MobiDBLite consensus disorder prediction 12 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1145 Vvi-Chr17 16799376 16799663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1145 1 33 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 66.667 2.97e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1145 - K20102 vvi:100253534 87.0409