Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1141 ATGGACAACAGGTCAAAAGTATTAGAAATGAGTGATCTTGAAAAAGATGAGACGCCAATGCTTTCAGACGCTTATTCACAATATTTGGATAAACCTAGGGTTTCTCACTCGGATAGACTTACCTCTAGAAATCGGAGTGCATCCAGTTCCATTCCTATGAACTCCATGGAGTCCTATCAAACTGAAAGCAACCTTGTAAATCATACTGGTCCCTTGAGGAATGAAAAGAAAACTCCGTTCATACCAATGAGTGGCCCACTGTTAAAATCTGAGGGTTTTTTCCCACCTACTCCTGGTGTACGGGGCCACAGAAAGGCAGAGCCAAGGGCAGAAAAATTTCCTTCATTTAATGGAATGGAATGGAATAATTGGCCCCATAACAACTATGCTGGAAAAAATGAACATCTTCTGAGGTCTGGACAGTTGGGAGTATGTAATGATCCTTACTGCACAATATGCCCAACACATTTCATTGACTCCAGACAGCAAAGGAACTCAAAGTTTCATAATGCTTTCTATGGAGATGCTAGAGGATGGGCAAGGAGATTTTTTTCTTCTCTACAATCATATGTTCCTGGAATCATGAACCCTCATACTAAAGTTGTTCAACAATGGAATAGATTTTTTGTCATTTCTTGCTTGTTGGCAATTTTTGTAGACCCTTTATTTTTCCTCTTGCTGTCTGTGCAACAGGAAAATAAGTGCATAATTATTGACTTGTCCCTGACAAAAACAATTGTGGCTTTCAGAAGCATGACTGATTTCATTTACTTGTTGAACATGCTTCTACAGTTTAGGCTGGCCTATGTTGCTCCAGAGTCTAGAGTGGTTGGTGCCGGCGACTTAGTTGACCATCCAAAAAAAATTGCTATCCATTACCTTCATGGATATTTTTTAATTGATTTATTTATTGTTTTACCGCTTCCTCAAGGCCAAGGGGTCTCTGTACCAAACAAATGA 960 0.3958 MDNRSKVLEMSDLEKDETPMLSDAYSQYLDKPRVSHSDRLTSRNRSASSSIPMNSMESYQTESNLVNHTGPLRNEKKTPFIPMSGPLLKSEGFFPPTPGVRGHRKAEPRAEKFPSFNGMEWNNWPHNNYAGKNEHLLRSGQLGVCNDPYCTICPTHFIDSRQQRNSKFHNAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQQWNRFFVISCLLAIFVDPLFFLLLSVQQENKCIIIDLSLTKTIVAFRSMTDFIYLLNMLLQFRLAYVAPESRVVGAGDLVDHPKKIAIHYLHGYFLIDLFIVLPLPQGQGVSVPNK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1141 319 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 145 314 - -
Vvi17g1141 319 MobiDBLite consensus disorder prediction 1 55 - -
Vvi17g1141 319 MobiDBLite consensus disorder prediction 41 55 - -
Vvi17g1141 319 SUPERFAMILY Voltage-gated potassium channels 197 311 - -
Vvi17g1141 319 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1141 Vvi-Chr17 16614152 16681587 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1141 14 310 Ion Channels AT3G17700 51.133 1.13e-102 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1141 K05391 - vvi:100257953 642.114