Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1139 ATGGGAGGTAGCGACGAAGGTGATGATGGGAAAGGTAGAAGAGCAGTATCTGTAGCGTCTGTGGATTACAACGAAGAATTCAAGGGCCGAAGAGATAGCATCGTCGAACGACTTTATACGCCTGTGATCATGATTTTGCTGGTCCTACCCATGTCCTTGGGATCATCTGGCGCAAATTATGCAAAGAATCTTTTGCGCACAGCAGTTCTTGTTCAGTACATTCCCAGGTTGTACAGGTTGCTAGAAGACCTTCAATATAGGGTTTACCTCACTTCAAGTGCAAAAAGACCCAATTGTCCTCTAGTGTTTGGCAAGGCCACAATAACTAAGAGTTTTCTTGAAGACCAGATCAAACCTAGGGAAGACAAATTGTTCTGCATAGAGGTTGTTGGTGAAGATGAAGAGATAAGATCATGA 417 0.4365 MGGSDEGDDGKGRRAVSVASVDYNEEFKGRRDSIVERLYTPVIMILLVLPMSLGSSGANYAKNLLRTAVLVQYIPRLYRLLEDLQYRVYLTSSAKRPNCPLVFGKATITKSFLEDQIKPREDKLFCIEVVGEDEEIRS* 139
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1139 Vvi-Chr17 16591694 16601380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1139 41 81 Ion Channels AT3G17700 73.171 1.47e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1139 K05391 - vvi:100257953 77.0257