Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1137 ATGGCCATTATTGGTCTAGGCCTGTTGCTCTTTGCTCTTCTAATTGGAAATATGCAGAACTTCCTACAGGCTCTTGGACGGAGAAGGTTAGAAATGTCACTACGACGTCGTGATGTTGAGCAGTGGATGAGCCATCGACGGTTGCCTGAATATCTTAGAAGGATTCTGTGTACAACTTCCAAATGCTCCTCACATGGAGCATGCATGTACTGCCTTACCACGCTTACGGAAAAAGCAATATCAGGTCTTGTATGGGAAAGATAG 264 0.4508 MAIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQWMSHRRLPEYLRRILCTTSKCSSHGACMYCLTTLTEKAISGLVWER* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1137 87 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 55 - -
Vvi17g1137 87 SUPERFAMILY Voltage-gated potassium channels 3 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1137 Vvi-Chr17 16576894 16582635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1137 1 54 Ion Channels AT3G17690 79.630 4.88e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1137 K05391 - vvi:100257953 93.2041