Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g1091 | ATGTTAATCTATGAATACATGCCTAACAAAAGCTTGGACTTCTTCATCTTTGATCCAACAAGAAAAGAATTGCTAGATTGGAAGAAACGTTTTAGCATCATTGAGGGGATTGCTCAAGGATTACTCTATCTTCATAAGTACTCCAGACTAAGGGTGATTCATAGAGACTTAAAAACAAGTAATATTTTATTAGATAACGACATGAACCCTAAAATTTCAGATTTTGGCATGGCAAAAATGTTTAGACAAGATCAATCGAGGGCAAATACAAATAGGGTCGTGGGCACATTGTAA | 294 | 0.3469 | MLIYEYMPNKSLDFFIFDPTRKELLDWKKRFSIIEGIAQGLLYLHKYSRLRVIHRDLKTSNILLDNDMNPKISDFGMAKMFRQDQSRANTNRVVGTL* | 98 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g1091 | 97 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 96 | IPR011009 | - | |
Vvi17g1091 | 97 | ProSiteProfiles | Protein kinase domain profile. | 1 | 97 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi17g1091 | 97 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 97 | - | - | |
Vvi17g1091 | 97 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase B120 | 7 | 97 | - | - | |
Vvi17g1091 | 97 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 52 | 64 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi17g1091 | 97 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 1 | 97 | - | - | |
Vvi17g1091 | 97 | Pfam | Protein kinase domain | 2 | 96 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi17g1091 | Vvi-Chr17 | 15066109 | 15066507 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi17g1091 | 1 | 97 | Receptor kinase-like Gene Family | AT4G23230 | 62.887 | 3.15e-44 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi17g1091 | Pkinase | 2.3e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g1091 | - | - | vvi:100258202 | 196.823 |