Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1077 ATGCCCACCACCACGACTTCTCGCTCTGGTGCCTTTCAGCAATACCCTTCAGTCTACCGCAAGGCTTCTCCTCACTCCCAACCTAGGACCTACGCCGTCTTTGATGTGGGCAGTTCTGGCAACCGTGTCCATGTTTTCTGCTTCGACAGCGATTTGAATCTTGTCCACATTGTAAAAAACCTCGAGCTCTTCATGCAGACAAAACCAAGTTTAGGTGCATGTCCAATGGAACCCCAACAAGCTGTAGAATCTCTGCTGCCCCTTCTAGATAAAGCTAAAAATGCTGTTCCAGCAGATCAAGACACAGGTCAAAGTTGGGGTAACTGCTAG 330 0.4879 MPTTTTSRSGAFQQYPSVYRKASPHSQPRTYAVFDVGSSGNRVHVFCFDSDLNLVHIVKNLELFMQTKPSLGACPMEPQQAVESLLPLLDKAKNAVPADQDTGQSWGNC* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1077 109 Gene3D - 33 101 - -
Vvi17g1077 109 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 31 100 IPR000407 GO:0016787
Vvi17g1077 109 Pfam GDA1/CD39 (nucleoside phosphatase) family 29 100 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1077 Vvi-Chr17 14669136 14669465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1077 1 99 Calmodulin-binding Proteins AT3G04080 48.000 1.61e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1077 K14641 - vvi:100267968 165.236