Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1030 ATGGAGAACTCCACCAGTCCTGGTTGCCCTCTACTTCATTTTTTTGTGATGGAAGGTGTTTATGTGAGTGTTGTCTTTACAAAATTTCTAGAGAGAGGATGGGTTCCTTTTGCCATTTCCTTAATACTTGCCTTCATAATGTTTGGGTGGTTCTATGGGAGGCAAAGAAAAATAGAATACGAGTTGACCCGTAAGATAAGCTTGGACAAACTTGAACAACTTTTATCTGACCCAAGTGTCCAAAGGGTTCCTGGATTATGCTTCTTTTACACCAATATTCAAGATGGTCTGACTCCAGTTCTGGGACATTACATAAAGAACATGTGA 327 0.3976 MENSTSPGCPLLHFFVMEGVYVSVVFTKFLERGWVPFAISLILAFIMFGWFYGRQRKIEYELTRKISLDKLEQLLSDPSVQRVPGLCFFYTNIQDGLTPVLGHYIKNM* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1030 108 Pfam K+ potassium transporter 11 107 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi17g1030 108 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 108 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1030 Vvi-Chr17 12825918 12826244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1030 11 108 Inorganic Solute Cotransporters AT4G13420 39.796 6.10e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1030 K03549 - vvi:100257576 184.882