Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1028 ATGGGTGAGAGCTGGGTGAGTGAGAGAAACAAGAATGGAGTGGGTACCGATGAAAATGAAGAAGAAGATGTGGAAGGCGTCGACTTCGAGCTGGAGGATGATAACCTCATGGACGAGGACGGCGCCGTCGACGTCGACAACCCATCCCCAAGCTCAAGCCCGCGATCACTGATGGCGCCCTCCTTTTCACTTGTCGTCGCCCCTAGCAAAGAAGGTGAGGTTTACTCCCCAGAAGTAAACTGTATCCTGATGATTCTTTGTGTTCTTGTGATACTAATTTTTGGGGATGGAAAAGATATTGGAAATGCTTTTGGAATTGTTGTTAGTTTAGTGATGCTGATCACCACTATATTGCTCACATTGGTCATGATCATGATATGA 381 0.4672 MGESWVSERNKNGVGTDENEEEDVEGVDFELEDDNLMDEDGAVDVDNPSPSSSPRSLMAPSFSLVVAPSKEGEVYSPEVNCILMILCVLVILIFGDGKDIGNAFGIVVSLVMLITTILLTLVMIMI* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1028 126 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 69 126 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi17g1028 126 MobiDBLite consensus disorder prediction 1 30 - -
Vvi17g1028 126 Pfam K+ potassium transporter 60 125 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1028 Vvi-Chr17 12814029 12815072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1028 72 126 Inorganic Solute Cotransporters AT2G35060 50.909 1.17e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1028 K03549 - vvi:100257576 69.3218