Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0952 ATGGCTCTCCTTCAATGGCTGAAGGAAGGTTTCCTACCCTCCTTCCTCTTTGCAGGCATTATTCTAGTAGCGGTGCTGAAGTTTCTTCAGAAGGGCATGTTAAGAAAAAGAAAATTCAATCTCCCACCCAGCCCTCGGAAGCTACCCATCATTGGCAACCTTCATCAGCTTGGCAACATGCCCCACATTTCTCTCCACCGCCTGGCTCAGAAGTTCGGCCCCATCATTTTCCTGCAACTTGGAGAGGTGCCAACAGTGGTAGTTTCTTCCGCTAGAGTAGCGAAAGAAGTGATGAAGACCCATGATCTGGCTCTTTCAAGCCGCCCCCAGATCTTTTCAGCAAAACACCTCTTCTATGATTGCACTGATATTGTGTTCTCTCCCTATAGTGCTTACTGGAGGCATCTACGGAAAATTTGCATACTTGAGCTACTGAGTGCCAAAAGGGTCCAATCATTTAGTTTTGTCAGAGAAGAAGAAGTTGCTCGCATGGTTCATCGGATTGCAGAGTCGTATCCCTGCCCCACCAATTTAACCAAGATTCTTGGACTCTATGCAAATGATGTCCTTTGCAGGGTCGCCTTTGGAAGGGATTTCTCAGCAGGAGGGGAGTATGATAGACATGGGTTCCAAACGATGCTCGAGGAGTATCAAGTATTGCTTGGAGGATTTAGTGTGGGAGATTTCTTCCCTTCCATGGAGTTTATACACAGCTTAACAGGCATGAAATCAAGACTACAAAACACCTTTCGACGTTTTGATCACTTTTTTGACGAGGTGGTGAAGGAACATCTCGATCCCGAGAGAAAGAAAGAGGAACACAAGGACCTCGTTGATGTTTTACTCCATGTCAAGGAGGAAGGCGCTACCGAAATGCCTCTCACCATGGATAATGTCAAGGCCATCATCTTGGATATGTTTGCTGCAGGAACTGATACAACCTTCATAACCCTAGATTGGGGAATGACAGAGCTCATCATGAACCCTAAAGTCATGGAAAGAGCACAGGCTGAAGTCAGAAGCATTGTTGGAGAGAGAAGAGTTGTGACAGAGAGTGATCTTCCACAACTGCACTACATGAAAGCCGTCATCAAAGAGATCTTCCGATTGCACCCTCCAGCACCAGTTTTAGTCCCAAGAGAATCCATGGAAGATGTAACAATTGATGGGTACAATATTCCAGCCAAAACAAGGTTTTTTGTTAATGCCTGGGCAATAGGGAGAGACCCAGAATCCTGGCGAAACCCTGAATCATTTGAACCACAAAGATTCATGGGTAGTACTATTGACTTCAAAGGCCAGGATTTTGAGTTGATACCTTTTGGGGCTGGGAGAAGAAGCTGCCCAGCTATTACATTTGGAGCAGCAACTGTTGAGCTTGCTCTTGCTCAACTTCTCCACAGCTTTGATTGGGAGCTTCCCCCTGGCATCCAAGCTCAAGATTTGGATATGACAGAAGTTTTCGGCATCACAATGCACAGGATAGCTAACCTAATCGTGCTTGCAAAACCACGCTTTCCCTAG 1524 0.46 MALLQWLKEGFLPSFLFAGIILVAVLKFLQKGMLRKRKFNLPPSPRKLPIIGNLHQLGNMPHISLHRLAQKFGPIIFLQLGEVPTVVVSSARVAKEVMKTHDLALSSRPQIFSAKHLFYDCTDIVFSPYSAYWRHLRKICILELLSAKRVQSFSFVREEEVARMVHRIAESYPCPTNLTKILGLYANDVLCRVAFGRDFSAGGEYDRHGFQTMLEEYQVLLGGFSVGDFFPSMEFIHSLTGMKSRLQNTFRRFDHFFDEVVKEHLDPERKKEEHKDLVDVLLHVKEEGATEMPLTMDNVKAIILDMFAAGTDTTFITLDWGMTELIMNPKVMERAQAEVRSIVGERRVVTESDLPQLHYMKAVIKEIFRLHPPAPVLVPRESMEDVTIDGYNIPAKTRFFVNAWAIGRDPESWRNPESFEPQRFMGSTIDFKGQDFELIPFGAGRRSCPAITFGAATVELALAQLLHSFDWELPPGIQAQDLDMTEVFGITMHRIANLIVLAKPRFP* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0952 507 FunFam Cytochrome P450 99A2 31 503 - -
Vvi17g0952 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 SUPERFAMILY Cytochrome P450 42 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vvi17g0952 507 CDD CYP71-like 71 498 - -
Vvi17g0952 507 Gene3D Cytochrome P450 33 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 Pfam Cytochrome P450 42 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0952 507 PANTHER CYTOCHROME P450 71B11-RELATED 26 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0952 Vvi-Chr17 11349869 11351521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0952 11 501 Cytochrome P450 AT3G26300 44.355 5.54e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0952 - - vvi:100265573 923.694