Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0949 ATGGGAAGCTTTCTAGATCTTCTGTACAAGGAAAACGCGTCGTTCTTTCTGCTATTTCTCCCCTTTTTCGTCTTCATATACTTCCTCATCAAATGGCTCTATCCTACTACTCCTGCAGTCACCACAAAGAGGCTACCTCCTTCCCCACCAAAGCTCCCAATCATTGGAAACCTCCACCAACTAGGCTTGCTCCCTCACCGCTCCCTCTGGGCCTTGGCTCAGCGCCATGGCCCCATTATGCTGCTCCATTTTGGCAAAGTTCCAGTGGTCATCGTCTCAGCTGCAGACGCTGCAAGAGAGATCATGAAGACCAATGATGTCATCTTTTTAAACAGACCTAAATCGAGCATCTTTGCGAAACTTCTCTATGATTACAAGGACGTTTCCATGGCCCCCTATGGAGAGTACTGGAGACAGATGAGGAGTATCTGTGTACTCCACCTTCTCAGCAACAGAAGGGTTCAGTCCTTCCGAGGAGTCCGCGAAGAAGAGACAGCCCTTCTGATGGAGAAGATCTCTTCCTCTTCTTCCTCCTCCACCCCAATTGATTTGAGCAAAATGTTTCTGTCCCTAACAAATGATCTCATATGCAGAGTTGCCCTAGGAAGAAAATACAGCGGAGATGAAACTGGAAGAAAATATAGAGAACTGCTGAAGGAGTTTGTGGGGTTGCTGGGTGGCTTCGATGTTGCCGACTACATTCCATGGCTGTCATGGGTGAACTTCATCAATGGTTTGGATGCAAAAGTGGAGAAAGTTGCTAAAGAGTTCGATAGATTTCTTGATGAAGTGGTGAAAGAGCACGTGGAGAGAAGGAAAAGAGGTGTAGATGAGGAAGTGAAGGATTTTGTGGACGTTTTGCTTGGCATTCAGGAGGATAATGTCACAGGCGTTGCCATAACTGGAGTTTGCATCAAAGCTCTTACTCTGGACATGTTTGCTGCTGGAAGTGACACTACATACACAGTCTTGGAGTGGGCAATGACAGAGCTCTTGAGGCACCCACAAGTCATGAGGCAACTTCAGAATGAGGTCAGAGGAATTGCTCAAGGCAAACTCCTCATAACTGAGGATGACTTAGACAAAATGCAATATTTGAAGGCAGTGATCAAAGAGACTCTCAGACTACACCCTCCAGTCCCACTACTACTTCCCAGAGAATCCACCCGGGGCGCCAAAATAATGGGCTACGACATTGAAGTAGGGACACAAGTCATTACCAATGCATGGGCAATTGGGAGAGACCCACTGTTATGGGATGAGGCTGAGGAGTTTCGGCCAGAAAGGTTCTTGAATTCTTCTATAGATTTCACAGGGAAAGACTTTGAGTTGATCCCATTTGGAGCTGGCCGGAGAGGTTGCCCGGGAACTCTGTTCGCGGCAATGGCAATCGAGGTTGCGTTAGCAAATCTTGTTCATCAGTTTGATTGGGAAGTGGGGGGTGGAGGTAGAAGGGAGGACTTGGATATGACTGAATGCACTGGTCTGACCATTCATAGAAAAGTTCCACTTCTTGCAGTTGCAACTCCATGGCCTCGCTGA 1542 0.4741 MGSFLDLLYKENASFFLLFLPFFVFIYFLIKWLYPTTPAVTTKRLPPSPPKLPIIGNLHQLGLLPHRSLWALAQRHGPIMLLHFGKVPVVIVSAADAAREIMKTNDVIFLNRPKSSIFAKLLYDYKDVSMAPYGEYWRQMRSICVLHLLSNRRVQSFRGVREEETALLMEKISSSSSSSTPIDLSKMFLSLTNDLICRVALGRKYSGDETGRKYRELLKEFVGLLGGFDVADYIPWLSWVNFINGLDAKVEKVAKEFDRFLDEVVKEHVERRKRGVDEEVKDFVDVLLGIQEDNVTGVAITGVCIKALTLDMFAAGSDTTYTVLEWAMTELLRHPQVMRQLQNEVRGIAQGKLLITEDDLDKMQYLKAVIKETLRLHPPVPLLLPRESTRGAKIMGYDIEVGTQVITNAWAIGRDPLLWDEAEEFRPERFLNSSIDFTGKDFELIPFGAGRRGCPGTLFAAMAIEVALANLVHQFDWEVGGGGRREDLDMTECTGLTIHRKVPLLAVATPWPR* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0949 513 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PANTHER CYTOCHROME P450 71B11-RELATED 28 509 - -
Vvi17g0949 513 CDD CYP71-like 75 504 - -
Vvi17g0949 513 FunFam Cytochrome P450 83B1 35 507 - -
Vvi17g0949 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vvi17g0949 513 Gene3D Cytochrome P450 37 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 SUPERFAMILY Cytochrome P450 46 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0949 513 Pfam Cytochrome P450 46 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0949 Vvi-Chr17 11284888 11286858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0949 47 509 Cytochrome P450 AT3G48270 54.310 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0949 - - vvi:100246781 1008.82