Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0944 ATGTCAGGTCCCATAGTGCAAAAATTCAACATGCTCCTATTGGATCCCTTGTCCTTCTCCCTCTTTCCCTTTTTCTTCTTCATCGTTCTCCTTGTGAGATGGCTCTTCAGTACCCCTCCAACAACCCACAAAACCTTACCACCTTCACCACCAAGGCTTCCTGTACTAGGAAACATGCACCAACTAGGCATCTATCCTTACCGTTCTCTTCTATGCTTAGCTCGGTGCTATGGCCCGCTCATGCTTCTTCAGCTTGGCAGGGTCCGGACACTTGTTGTGTCATCCCCAGATGCTGCCCAGGAGATCATGAAAACGCATGATCTCATCTTTGCTAACAGGCCCAAGATGAGTTTGGGAAAGAGACTTCTGTATGATTACAAGGATGTGTCGGTGGCTCCTTATGGGGAGTACTGGAGGCAGATGAGAAGCATTTGTGTGCTCCACCTTCTTAGTAACAAGAGGGTTCAGTCTTTTAACACTGTTAGAAGAGAAGAAATCTCCCTCTTGATCCAGAAGATTGAAGAGTTTTCTTCATTATCAACGTCTATGGACTTGAGTGGAATGTTTATGAGGCTTACAAATGATGTGATATGCAGGGTGGCTTTTGGGAGGAAGTACAGTGGAGATGAAAGAGGGAAGAAGTTCAGAAGATTGTTGGGGGAGTTTGTGGAGTTATTGGGAGGTTTCAATGTAGGGGACTACATTCCATGGCTTGCTTGGGTGGAATATGTAAATGGTTGGAGTGCCAAGGTGGAGAGAGTTGCCAAAGAATTTGATGAATTTTTGGATGGAGTAGTTGAAGAGCATTTGGATGGTGGTACGGGTTCAATTGCTAAAGGTGATAACGAGAAGGATTTTGTGGACGTTTTGCTTGAAATTCAGAGGGATGGAACTCTTGGCTTTTCCATGGACAGAGATAGCATCAAAGCTCTCATTTTGGATATATTCGCTGGTGGAACTGATACTACTTACACAGTGCTAGAATGGGCAATGACAGAACTCTTAAGGCACCCCAAAGCCATGAAGGAACTGCAGAATGAAGTGAGGGGAATTACAAGAGGCAAAGAGCACATAACTGAGGATGACTTGGAGAAAATGCACTACTTGAAAGCGGTAATCAAAGAGACTCTTCGGCTGCATCCTCCCATTCCATTACTGGTTCCACGAGAATCAAGCCAGGATGTCAACATAATGGGCTACCATATTCCAGCTGGAACGATGGTTATTATCAATGCTTGGGCCATTGGAAGAGACCCCATGTCCTGGGATGAGCCGGAGGAATTTAGGCCAGAGAGGTTCTTGAACACTAATATAGATTTCAAAGGACATGACTTTGAGTTGATTCCCTTTGGAGCTGGAAGGAGGGGTTGCCCAGGAATCTCATTTGCTATGGCCACAAATGAGCTTGTATTAGCAAATCTTGTGAACAAGTTTGACTGGGCATTGCCTGATGGAGCAAGAGCAGAGGATTTGGACATGACTGAATGCACTGGTCTTACTATCCATAGAAAGTTTCCTCTGCTTGCTGTTTCAACTCCATGTTTTTAG 1548 0.449 MSGPIVQKFNMLLLDPLSFSLFPFFFFIVLLVRWLFSTPPTTHKTLPPSPPRLPVLGNMHQLGIYPYRSLLCLARCYGPLMLLQLGRVRTLVVSSPDAAQEIMKTHDLIFANRPKMSLGKRLLYDYKDVSVAPYGEYWRQMRSICVLHLLSNKRVQSFNTVRREEISLLIQKIEEFSSLSTSMDLSGMFMRLTNDVICRVAFGRKYSGDERGKKFRRLLGEFVELLGGFNVGDYIPWLAWVEYVNGWSAKVERVAKEFDEFLDGVVEEHLDGGTGSIAKGDNEKDFVDVLLEIQRDGTLGFSMDRDSIKALILDIFAGGTDTTYTVLEWAMTELLRHPKAMKELQNEVRGITRGKEHITEDDLEKMHYLKAVIKETLRLHPPIPLLVPRESSQDVNIMGYHIPAGTMVIINAWAIGRDPMSWDEPEEFRPERFLNTNIDFKGHDFELIPFGAGRRGCPGISFAMATNELVLANLVNKFDWALPDGARAEDLDMTECTGLTIHRKFPLLAVSTPCF* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0944 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Vvi17g0944 515 CDD CYP71-like 77 507 - -
Vvi17g0944 515 Gene3D Cytochrome P450 37 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 SUPERFAMILY Cytochrome P450 47 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi17g0944 515 PANTHER CYTOCHROME P450 71B11-RELATED 31 512 - -
Vvi17g0944 515 FunFam Cytochrome P450 83B1 34 510 - -
Vvi17g0944 515 Pfam Cytochrome P450 47 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0944 Vvi-Chr17 11179544 11181499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0944 47 513 Cytochrome P450 AT3G48280 55.128 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0944 - - vvi:100253593 1016.91