Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0908 ATGGAGGAAGAGAATTACAAGAAGCAGGCTGAAGAGTGGCAATATCAAAGCATGCCGATGAAGTCTCCAGAAATAGTGGAGATTGGAGAGGATAGCAAGAGTTTTACAAGCAGCAGAGAGGGAGGCTTTAAGGATGTGTATGTGGCAGTTGGCAGGGATGACTTGGATGTTCTGAAATGGGCTTTAGATCACTCTGTTTCTCCCCAAGCTCGGATTTTCCTTGTTCATGTCTTCCCTCCCCAAACATACATCTCTACACCTGTTGGAAGACTGTCTAGAAGCCAATTGAGCAAAGAACAGCTGAAAGTTTATATCAATGAGGAGAATAACAGGAGGCGAAACCTCTTGCAGAAATACATTCGATTGTGTACTGATGCCAAGGTGACTGTGGACACAATGCTTCTAGAGAGCAACACGACAACCAAAGCAATTCTTGATCTTATTCCAGTCCTAAACATTACCAACCTTGTTATAGGAACCAAAAGGCCGCCTTGCCCAAGGCGATCCTGGAAAAAACTGGGAACGGGAGAGTTCATCCAGAAGAATGCACCTGAATTTTGTGAGGTCACCATTGTTTTTGATGGCAAGAAGGTTCTGGACGGTGAGCAGGTAGGAGAGCTGGTTCATTCATCTCCAGCATCCAGTCACCGTAAACCAGAAACTACTCGAAACTCTGAAAGGAATTTCTTTGAGTGTGCTTGCTTTTCAGGCAAGTTCAACTGA 723 0.4467 MEEENYKKQAEEWQYQSMPMKSPEIVEIGEDSKSFTSSREGGFKDVYVAVGRDDLDVLKWALDHSVSPQARIFLVHVFPPQTYISTPVGRLSRSQLSKEQLKVYINEENNRRRNLLQKYIRLCTDAKVTVDTMLLESNTTTKAILDLIPVLNITNLVIGTKRPPCPRRSWKKLGTGEFIQKNAPEFCEVTIVFDGKKVLDGEQVGELVHSSPASSHRKPETTRNSERNFFECACFSGKFN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0908 240 Coils Coil 98 118 - -
Vvi17g0908 240 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 7 240 - -
Vvi17g0908 240 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 47 162 - -
Vvi17g0908 240 Gene3D HUPs 46 182 IPR014729 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0908 46 198 U-box Gene Family AT5G65500 33.540 1.33e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0908 - - vvi:100852504 476.092