Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g0907 | ATGGGAGTGGCTTTAGAGGATAATGATGACTATGGAACTCCACCCTTCAATGCAGAACAGCTTGTGAGTCTTCATGGGAAGACTACGTTGACTGCTGCTATTACAAGGGTGCTGGCAGAGGAAGGAAAAGCAAAGGTAGTTGCCCTCGATGAAATTGACAAGGCTCCTAAAGAGAAGAAGAGAGGAATTACAATTGCAATGGCCCATGTCGAGTATGAGACTGCTAAGCGGCACTATGCCCATGTGGACTGTCCAGGACATGCGGATTATGAGAAGAATATGATTACTGGAGCTGCCCAAATGGATGTTAGTATTCAGGTCGTTTTTGCTCCTAATGGACCCATGCCACGGACAAAGGAACACATTCTACTTGCGCGCCAGAAATGGAATTCCGTGAGCTTCTTAGCTTCTACGAGTTCCCTGGGGATGAAATTCCCATCATTCGGGGCTCAGATTTATGCGCGTTACAAGGACACTCAATGA | 483 | 0.4679 | MGVALEDNDDYGTPPFNAEQLVSLHGKTTLTAAITRVLAEEGKAKVVALDEIDKAPKEKKRGITIAMAHVEYETAKRHYAHVDCPGHADYEKNMITGAAQMDVSIQVVFAPNGPMPRTKEHILLARQKWNSVSFLASTSSLGMKFPSFGAQIYARYKDTQ* | 161 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g0907 | 160 | PRINTS | GTP-binding elongation factor signature | 60 | 68 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi17g0907 | 160 | PRINTS | GTP-binding elongation factor signature | 96 | 107 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi17g0907 | 160 | PRINTS | GTP-binding elongation factor signature | 80 | 90 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi17g0907 | 160 | PANTHER | ELONGATION FACTOR TU-RELATED | 25 | 126 | - | - | |
Vvi17g0907 | 160 | FunFam | Uncharacterized protein | 23 | 135 | - | - | |
Vvi17g0907 | 160 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 53 | 68 | IPR031157 | - | |
Vvi17g0907 | 160 | Gene3D | - | 23 | 135 | IPR027417 | - | |
Vvi17g0907 | 160 | Pfam | Elongation factor Tu GTP binding domain | 25 | 128 | IPR000795 | GO:0003924|GO:0005525 | |
Vvi17g0907 | 160 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 25 | 127 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi17g0907 | Vvi-Chr17 | 10720461 | 10720943 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi17g0907 | 52 | 125 | Eukaryotic Initiation Factors Gene Family | AT1G07930 | 39.506 | 8.90e-13 | 62.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g0907 | K02358 | - | gmx:100791600 | 184.882 |