Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0891 ATGGACCGCTTTGATTCAGCAAAGGCTGCTCATGAGAAAGTTGGAACATCCTATGACGGAGCTTTGATTTCTGTGGTTGATAAAAAGATGAAGGAGCATACAGACACTTTCCTGCATGTTGTGGATGCTCTAATCACACGATTATCTCAACTGGAGAGCAGAACTCGCAACATTGAAAGTTATGTTGATGAGCTGAAAGCGTCCACTGAATATAATCATGGGAGAACTAATGGAAAGCTGAAGCAGTTAGAGAATACTCTAAGAGAGGTCCAAGGTGGCATACACGACTTAAGAGATAAACAAGAAATAGTGGAGGCTCAGCTGCAGCTTGCTAAGCTTCAAGTGTCCAAAGGTAAGCTGCAAGCAGAGAACCAAATCAGTGCTACACAAGCTCAAATAGTGCAAGGAATATCTTCAACCGCTCCTCAGCAAACCCACCAACCACTGCTGGTTCCTGTTTCTTGTCAACAACCTCCTCCTGCTCTTCTTTCTAATGCCTCTCCATCCCTAAATCACCAGAATCCACCACCTCCACCACCACCACCCCCACCACCACCTGCCTCAGCAGCAGTACAGCTTCCTACACAAGTACCTCAGAACCAAATTTCTTTTTCACATCCTGGATCTTACTACTTGCCACATCCTCCGGCTCCAGGAACCACACATCAGCAATGCCAAATTCCTCCAGCTCCACAATCGCAGCTACCACCTTCAGTACCACATCAGCCTTACCAACCAGCCCCTCAATTACAACCCTCACAATTACCACAATTACCACATGTGCCCCCACATCTTAGTGCAGTTAATCCCCAAGTCCCTCCATCAGGCCACCCTATCAAAGAAATCCCTTACATGTCATCTCAAAGCTACCCTCCAAGCTTCCATCAACCCCCTTTTCGGCCACCTAGCAGTGTGCCCTCCACCCAACAGTTTTACAAGGGTTCTACTCTGAAGATGGACGAAGAACCACCAAGCAGACCGAATTCAGAGTTTCCCACCGGGTATGGAACACCACCTGCATATGCTCATTTGAGTGACTTTTATGCTCGCAGTGGATCTAATTCCTACTCCAATGATTCAACAATGAAACCTTTGCAATTCTCACCTTTGGCTTCCGTCCCAAGTGGTGGAACCAGCTATACACAACTCCCTACTGCCCAGATACTACCACATGCGCTGCCCACTGCCTCCAGTGTGGGTGGTGGGTCAGGTCCAAGTGTGACAGGAAATAGGATTTCAAGTGACGATGTTGTTGACAAAGTTGCAGCAATGGGATTTCGAAGAGACTTGGTGAGAGCAACGGTGAGGAAACTAACAGAGAATGGGCAATCAGCGGACCTTAATGTTGTGCTTGATAAGCTGATGAATGATGGGGAGGATCAAGCCCAGACAGTTTGGTTTACGCGATAA 1410 0.4738 MDRFDSAKAAHEKVGTSYDGALISVVDKKMKEHTDTFLHVVDALITRLSQLESRTRNIESYVDELKASTEYNHGRTNGKLKQLENTLREVQGGIHDLRDKQEIVEAQLQLAKLQVSKGKLQAENQISATQAQIVQGISSTAPQQTHQPLLVPVSCQQPPPALLSNASPSLNHQNPPPPPPPPPPPPASAAVQLPTQVPQNQISFSHPGSYYLPHPPAPGTTHQQCQIPPAPQSQLPPSVPHQPYQPAPQLQPSQLPQLPHVPPHLSAVNPQVPPSGHPIKEIPYMSSQSYPPSFHQPPFRPPSSVPSTQQFYKGSTLKMDEEPPSRPNSEFPTGYGTPPAYAHLSDFYARSGSNSYSNDSTMKPLQFSPLASVPSGGTSYTQLPTAQILPHALPTASSVGGGSGPSVTGNRISSDDVVDKVAAMGFRRDLVRATVRKLTENGQSADLNVVLDKLMNDGEDQAQTVWFTR* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0891 469 MobiDBLite consensus disorder prediction 230 256 - -
Vvi17g0891 469 Coils Coil 80 123 - -
Vvi17g0891 469 Pfam UBA-like domain (DUF1421) 415 458 IPR010820 -
Vvi17g0891 469 MobiDBLite consensus disorder prediction 192 207 - -
Vvi17g0891 469 MobiDBLite consensus disorder prediction 289 337 - -
Vvi17g0891 469 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 4 467 - -
Vvi17g0891 469 MobiDBLite consensus disorder prediction 151 170 - -
Vvi17g0891 469 MobiDBLite consensus disorder prediction 171 191 - -
Vvi17g0891 469 MobiDBLite consensus disorder prediction 151 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0891 Vvi-Chr17 10499755 10509293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0891 1 123 Trihelix Transcription Factor Family AT5G14540 52.033 1.50e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0891 - - vvi:100250211 865.914