Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0876 ATGGAACCCAGGTCGCCTTCCAAGTTTAAAATTCCTATCATGGGATTTGTTCAATATAAACGGGTCTTCAATATTGGTATCATAGTTCTGGCCGTTGTGCTGTTACTGGTTGGTGTTTATCATGTATTTGGACCGGGGAGAGGTGGCAATGTGTTGGGAAGGCCTTACTTTACTGTGGTTGTGGACTGTGGAAGCACAGGGACGAGAGTGAATGTGTATGAGTGGGTCATGAAAGGTGAGAGGAACTGGGAGCTGCCTATGTTGATGCATTCATATCCCGACTTGTCAACCAAGAGTCCTCTTTGGAAAGGTGCTTGTCAGTACCATTGCTTGCAAACTGAACCTGGGTTAGATAAATTTGTTGGTAATTATTCAGGGGTGAGGGCGTCTTTGGAGCCATTGATTCTTTGGGCTGAGCAGCAGGTACCACCTGAAAGACGTGGAGAGACTCCGGTTTTTGTTCTAGCTACTGCTGGACTAAGGAGGCTGGATGTTGTTGATGTTAAGCAAGTTTTGGATGATGCAGAGGCTGTTGTGGGAAAGCATGCATTTTTGCATAGGAGAAGTTGGATCAGGGTGTTGAGTGGAAAAGAAGAAGCTTACTATGGTTGGATTGCTCTGAACTATAAGATGGGGAGACTTGGAAATAATTCAAGGTTGCCCACTTTGGGACTTCTGGATTTGGGTGGTTCATCATTGCAGGTGGTGATGGAGGTAGGTGAATCAAGAGAAGATGGGCACTTGGTCAGATCAAGGGTTGGCTTGTTTGAACATCGAATCTTGGCATACTCATTGACGGAATTTGGTATAAATAAGGCATTTGATAGGACAGTTAGTATGCTAAGCCAAGTGCAACCACTCAGAGAAGGTTCTGGCCGTAAACTGGAACTCCAGCATCCTTGTCTTGGTTCTGATTATGTGAACAATTACACCTGTGATGGTTGCATTTTTTCAAATGCTACTGACTCGAATAGTTCTCAGCCCATGCGAAATCATCACTTCACTTCTGTGTATCTAGTTGGAGACCTGAATTGGGAGCAATGCAAAGGACTTGCAAGGACTGCTGCAATACATTCAAGCAGCTCAGATTGGTCCAACCTAACACTTGCTTTAAACTGCAAAGCACACTTGCCTTCTCATAGTGGCAGCAATATACTGAATTCTAAAGCCACCACCCATGCTGCTGCATGCTTTCATGCTTTGTCTGGATTTTTTGTTGTTTACACCATGCTGAATTTGAGTCAAAGAGCCAACATGACAGAAATTTGGGAGAGAGGCCAGCTACTATGTTCAAGATCAGATGCTCATTTTGGCAGCATTTCCGGAAATTATGCTAGGCAGTTTTGTTTCAGTGTGCCCTATTTAGCTTCACTCATTGAAGATGGTCTATGTCTTGGTGATGCAGAAATAAATTTTGGCCCGGGAGATGTTTCTTGGACTTTAGGAGCTGCCTTGGTTGAAGGGGAATACTTGTGGCTAAGTACCACTAATTCTCGGTTGAGCATATCATCCTTGAAAATAAAGTCAGTCTTAGCATCACCATTTTTCCTATTTATTTTGCTTCTAGGTCTTCTTCTCATTGTTTACTGTAGTCAAATTAAGCTGCCTATGCCCGGAAAAAGAGGTGCCGGTGTTAGATCATCCTTGCCATCCTATATCTATCCAAAACGCAGGCCAAACTAA 1683 0.4361 MEPRSPSKFKIPIMGFVQYKRVFNIGIIVLAVVLLLVGVYHVFGPGRGGNVLGRPYFTVVVDCGSTGTRVNVYEWVMKGERNWELPMLMHSYPDLSTKSPLWKGACQYHCLQTEPGLDKFVGNYSGVRASLEPLILWAEQQVPPERRGETPVFVLATAGLRRLDVVDVKQVLDDAEAVVGKHAFLHRRSWIRVLSGKEEAYYGWIALNYKMGRLGNNSRLPTLGLLDLGGSSLQVVMEVGESREDGHLVRSRVGLFEHRILAYSLTEFGINKAFDRTVSMLSQVQPLREGSGRKLELQHPCLGSDYVNNYTCDGCIFSNATDSNSSQPMRNHHFTSVYLVGDLNWEQCKGLARTAAIHSSSSDWSNLTLALNCKAHLPSHSGSNILNSKATTHAAACFHALSGFFVVYTMLNLSQRANMTEIWERGQLLCSRSDAHFGSISGNYARQFCFSVPYLASLIEDGLCLGDAEINFGPGDVSWTLGAALVEGEYLWLSTTNSRLSISSLKIKSVLASPFFLFILLLGLLLIVYCSQIKLPMPGKRGAGVRSSLPSYIYPKRRPN* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0876 560 Gene3D - 52 193 - -
Vvi17g0876 560 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 27 488 IPR000407 GO:0016787
Vvi17g0876 560 Pfam GDA1/CD39 (nucleoside phosphatase) family 57 486 IPR000407 GO:0016787
Vvi17g0876 560 Gene3D Exopolyphosphatase. Domain 2 195 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0876 Vvi-Chr17 10237820 10240695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0876 27 487 Nodulin-like Gene Family AT4G19180 37.421 8.38e-92 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0876 - - vvi:100265564 1080.47