Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g0864 | ATGCATTTCTCAATCAGAATTCCTCAGTGTAAGGTATGGATCTCCCTTGTGTATTCAATGTTGTTGTTCTCTCTGTCCCTCTCCGATCCTCGAATCTCCCAAGCAGGCCTACTTTGTGGAGACACAAAGTCGGCCCCATCCATCTACATCCCAAATTTCATTCAAGTCATGGAAGCTATCGCCAAAAGTATGGTGCAACAAGGCTGGGGATATGCCAACATCACAAAAAGTCCTGTGATTTTCGGGTTATCCCAATGCTACAGTGATCTCTCAAAGGATGATTGCCTCTCCTGCTTTGCTGAGAGCCGCACCAAGCTCCCCAGATGCCTTCCTGCCATTGCAGCTCGAATATATCTTGATGGTTGCTTCCTTCGCTATGACAATTACAGCTTCTTCAACGAGAGCATTGACCCGAATCATGATATGGTTAGGTGCAGTGAGCCAAGTGGCGTTCTCAAGGATAATTACACGAGATCGGAGTTCTCGAAGAAAGTTGATGAAGTGATCAATAACGTAACTAAAACAGCTGTGCAGAAGCAGGGTTTTGCGGTGGCAGGGATGAAAGGAGGAGCGGTTGTGGCCTATGCATTGGCACAGTGTTGGAAGACAGTTGATCAGAAGGGGTGTAGAGATTGCTTGGTGAATGCTGAGTCTGCAGTGAGAAGGTGTCTGCCTGGTTCCGAGGGGAGGGCTCTGAATGCTGGCTGTTATTTGAGGTATTCTACTGAGAAATTTTACAATGACGGCACAGCAAAAAAGAGTGGTAAAGGATTGTCTGACACTGGGATGATCATCGCATTCATTTTATCAGTACTCGCGGTTTGCTTGCTCGCTTTCCTTGGTGCTTTTGTTGGCTACATACTCTTATCAAAGAGAAAAAGAAACAACAATAATGCTCTTGCTCGGATTCCAACATGTATAAACAGGTCTGACCTGAATTTCAAGTATGAAACACTTGAGAGGGCAACTAATTTTTTTGATTCTTCAAGGAAGTTAGGCCAAGGGGGAGCAGGATCTGTATTCAAGGGGACTCTCCCTGATGGGAGAACTGTTGCTGTAAAGAGATTGTTCTTCAATACGCGTCAATGGGTGGATGAGTTCTTCAATGAAGTGAACTTGATCAGCAGAATTCAACACAAGAACCTTGTGGGACTTCTGGGTTGCAGTATAGAAGGTCCAGAGAGCCTTCTAGTTTATGAATATGTACCCAACAAGAGTGTTGATCAAATCCTTTTTGGTAAAGACGGCACCCAAGGTCTAAGCTGGCAGCAGCGGTTTGAGATCATCGTCGGAACAGCTGAGGGGCTTGCGTATCTTCATGGAGGTTCTGAAGTGAAGATTATTCACAGAGACATAAAAGGCAGCAACATACTGCTTGATGAGAATCTTAATCCAAAGATTGCTGATTTTGGACTTGCAAGATGTGTGGCTCCTGATAAATCTCATGTTAGCACTGGAATTGCTGGGACACTGGGGTATATGGCACCTGAATATCTTGTTCGTGGGCAGTTATCAGAGAAAGCAGACGTTTATGCCTATGGTGTGCTGATTCTTGAGATTGTATGTGGTAGGAAGAACTGTATTTTTGTGCAGGGGTCAGACTCAGTTCTGCAAACAGTTTGGAAGCATTATAAATCAAATAGCGTTGTCCGATCTGTGGATCCCTCCTTGAAAGGTGATTTTCCACTGAATGAGGCAAGAAATGTGGTTCAGATTGGGCTGCTGTGCACGCAAGCTTCCTTTGCATTAAGGCCATCCATGTCCCAAGTAGTTCAGATGCTAACCGATCAAAACAGTGTGATTCCTGAACCTATGCAGCCTCCATTCCTGAATGCCAGTGTTCTAGACCCGAGCAATTCCCTCAAAAATTCTATTACCAGAAACTTGACTCCATCTTTTCACACAGCAACTGAACCACCATCCACTCATTCAAGCAATTCCTCTGCTATGGCTAGCCAGGAATCATACACTCCTTCAGCAATGGATGTATCAGGACCAAGGTAG | 2004 | 0.4486 | MHFSIRIPQCKVWISLVYSMLLFSLSLSDPRISQAGLLCGDTKSAPSIYIPNFIQVMEAIAKSMVQQGWGYANITKSPVIFGLSQCYSDLSKDDCLSCFAESRTKLPRCLPAIAARIYLDGCFLRYDNYSFFNESIDPNHDMVRCSEPSGVLKDNYTRSEFSKKVDEVINNVTKTAVQKQGFAVAGMKGGAVVAYALAQCWKTVDQKGCRDCLVNAESAVRRCLPGSEGRALNAGCYLRYSTEKFYNDGTAKKSGKGLSDTGMIIAFILSVLAVCLLAFLGAFVGYILLSKRKRNNNNALARIPTCINRSDLNFKYETLERATNFFDSSRKLGQGGAGSVFKGTLPDGRTVAVKRLFFNTRQWVDEFFNEVNLISRIQHKNLVGLLGCSIEGPESLLVYEYVPNKSVDQILFGKDGTQGLSWQQRFEIIVGTAEGLAYLHGGSEVKIIHRDIKGSNILLDENLNPKIADFGLARCVAPDKSHVSTGIAGTLGYMAPEYLVRGQLSEKADVYAYGVLILEIVCGRKNCIFVQGSDSVLQTVWKHYKSNSVVRSVDPSLKGDFPLNEARNVVQIGLLCTQASFALRPSMSQVVQMLTDQNSVIPEPMQPPFLNASVLDPSNSLKNSITRNLTPSFHTATEPPSTHSSNSSAMASQESYTPSAMDVSGPR* | 668 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g0864 | 667 | Gene3D | - | 39 | 131 | IPR038408 | - | |
Vvi17g0864 | 667 | Gene3D | - | 150 | 245 | IPR038408 | - | |
Vvi17g0864 | 667 | Pfam | Salt stress response/antifungal | 155 | 242 | IPR002902 | - | |
Vvi17g0864 | 667 | Pfam | Salt stress response/antifungal | 44 | 129 | IPR002902 | - | |
Vvi17g0864 | 667 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 447 | 459 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi17g0864 | 667 | ProSiteProfiles | Protein kinase domain profile. | 326 | 610 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi17g0864 | 667 | CDD | STKc_IRAK | 332 | 595 | - | - | |
Vvi17g0864 | 667 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 83 | 621 | - | - | |
Vvi17g0864 | 667 | Pfam | Protein kinase domain | 327 | 592 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi17g0864 | 667 | FunFam | Cysteine-rich receptor-like protein kinase 42 | 57 | 131 | - | - | |
Vvi17g0864 | 667 | SMART | serkin_6 | 326 | 601 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi17g0864 | 667 | ProSiteProfiles | Gnk2-homologous domain profile. | 140 | 245 | IPR002902 | - | |
Vvi17g0864 | 667 | FunFam | Cysteine-rich receptor-like protein kinase 3 | 146 | 245 | - | - | |
Vvi17g0864 | 667 | SUPERFAMILY | Protein kinase-like (PK-like) | 313 | 621 | IPR011009 | - | |
Vvi17g0864 | 667 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 402 | 602 | - | - | |
Vvi17g0864 | 667 | MobiDBLite | consensus disorder prediction | 630 | 667 | - | - | |
Vvi17g0864 | 667 | Gene3D | Phosphorylase Kinase; domain 1 | 287 | 401 | - | - | |
Vvi17g0864 | 667 | Gene3D | Transferase(Phosphotransferase) domain 1 | 402 | 603 | - | - | |
Vvi17g0864 | 667 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 291 | 401 | - | - | |
Vvi17g0864 | 667 | ProSiteProfiles | Gnk2-homologous domain profile. | 31 | 131 | IPR002902 | - | |
Vvi17g0864 | 667 | MobiDBLite | consensus disorder prediction | 630 | 660 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi17g0864 | Vvi-Chr17 | 10011295 | 10014385 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi17g0864 | 47 | 616 | Receptor kinase-like Gene Family | AT1G70520 | 47.341 | 3.83e-176 | 514 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi17g0864 | Pkinase | 1.5e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g0864 | - | - | vvi:100250205 | 1303.12 |