Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0862 ATGAAATGGGCAATGAGGCTTAGAGTGGCTCTTTATTTGGCACAAGCTTTGGAATACTGCAGTATTAAAGGGCGGGCATTGTACCATAACCTGAATGCTTACAGAGTTTTGTTTGATCAGGATGGTAATCCCAGGCTTTCCTACTTTGGCCTTATGAAGAATAGCAGAGATGGCAAAAGCTAA 183 0.4208 MKWAMRLRVALYLAQALEYCSIKGRALYHNLNAYRVLFDQDGNPRLSYFGLMKNSRDGKS* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0862 60 Gene3D Transferase(Phosphotransferase) domain 1 1 60 - -
Vvi17g0862 60 FunFam - 1 60 - -
Vvi17g0862 60 ProSiteProfiles Protein kinase domain profile. 1 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi17g0862 60 SUPERFAMILY Protein kinase-like (PK-like) 2 58 IPR011009 -
Vvi17g0862 60 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 60 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0862 Vvi-Chr17 9967595 9967777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0862 1 53 Strubbelig Receptor Gene Family AT1G78980 40.351 2.50e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0862 - - mnt:21389484 120.938