Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0849 ATGCAGAGCACCGCTTTCACTTTCTCTCCTTCCATCTCCTCCATCTCTCTCTCCAAACCTCTCAAGCCTGCCGCTTCTCTCTCTAGATTCAGACATATTTCCCTCTCTTCTTCTTCTTCCAAATCTCCTGATCTCGCCTCTTCCAATGGCGTCTCTGCTTCGTCCTCCGTTCGGACGCCGGCTGCGCTCTCCTCGTCGAGGTTCGGCGCGTTTGGTTCTGCTCCCTACCTCGTTGAGGATCGGAGGAGGGGTGATTTGACGGTTAGGGCGAGTTCGGTGCCGGAGAGCGCCGGGGAGAGCGAGAAGTCGGGGAACTTGGTTCAGACGTTGCAGCTCGGGTTGTTGTTCGGTCTTTGGTACCTTTTCAATATCTACTTCAATATCTACAACAAGCAGGTTCTGAAGGTCTACCCATTCCCTGTAACTGTCACCGTGGTTCAGTTTGCAGTAGGGACTGTACTTGTTATTCTTATGTGGGGACTTAATCTATATAAGAGACCAAAAATTAGCAGTTCGCAGCTTGTAGCAATCCTGCCACTTGCTGTGGTGCACACGTTAGGCAACCTGTTTACTAATATGAGTCTTGGGAAAGTGTCTGTTTCATTCACTCACACAATTAAAGCTATGGAGCCCTTTTTCTCAGTTGTCCTCTCTGCTATGTTTCTAGGAGAGTTTCCTACAATCTGGGTGCTCTCCTCCCTTCTTCCTATTGTTGGTGGAGTGGCGCTGGCATCAGCCACTGAGGCCTCCTTCAATTGGTCCGGGTTTTGGAGTGCAATGGCATCAAATTTGACAAACCAATCTCGTAATGTTCTTAGCAAGAAGTTCATGATTAAGAAAGAGGATTCATTGGATAACATTACCCTCTTCTCAATAATCACAATTATGTCCTTTATCTTGTTAGCCCCTGTGTCTATTTTCATGGAAGGCATAAATTTTACCCCTTCATATCTGCAGTCTGCTGGACTGAATATGGGACAGATCTACAAAAGGTCTCTCATTGCCGCACTCTGCTTCCACGCATATCAGCAGGTCTCTTATATGATATTGCAAAGGGTATCCCCAGTTACCCACTCTGTGGGTAATTGTGTTAAGCGGGTGGTGGTCATTGTTACTTCTGTTCTCTTCTTCCGCACCCCTGTTTCACCGGTCAACTCATTGGGCACTGGCGTGGCCCTTGCTGGAGTGTTCCTGTATTCAAGAGTGAAGCGCATCAAGCCAAAGACAGCTTGA 1233 0.4777 MQSTAFTFSPSISSISLSKPLKPAASLSRFRHISLSSSSSKSPDLASSNGVSASSSVRTPAALSSSRFGAFGSAPYLVEDRRRGDLTVRASSVPESAGESEKSGNLVQTLQLGLLFGLWYLFNIYFNIYNKQVLKVYPFPVTVTVVQFAVGTVLVILMWGLNLYKRPKISSSQLVAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEFPTIWVLSSLLPIVGGVALASATEASFNWSGFWSAMASNLTNQSRNVLSKKFMIKKEDSLDNITLFSIITIMSFILLAPVSIFMEGINFTPSYLQSAGLNMGQIYKRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPVNSLGTGVALAGVFLYSRVKRIKPKTA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0849 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 156 245 - -
Vvi17g0849 410 Pfam Triose-phosphate Transporter family 110 400 IPR004853 -
Vvi17g0849 410 MobiDBLite consensus disorder prediction 35 57 - -
Vvi17g0849 410 PANTHER SOLUTE CARRIER FAMILY 35 111 404 - -
Vvi17g0849 410 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 110 408 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vvi17g0849 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 324 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0849 Vvi-Chr17 9847204 9851736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0849 1 408 Antiporters AT5G33320 68.599 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0849 K15283 - vvi:100248370 721.85