Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0846 ATGGAAGAAACATTTGTTCCCTTCCGCGGAATCAAGAATGATCTCAAAGGAAGAATTTTATGCTACAAGCAAGACTGGACTGGCGGTCTTCGAGCAGGTATCGGGATTCTGGCTCCAACGACATACATATTCTTTGCTTCAGCAATTCCAGTCATATCTTTTGGGGAGCAGTTGGAAAGATACACAAATGGAACCTTAACTGCAGTGCAAACCCTTGCATCAACAGCCCTCTGTGGGATCATCCACTCAATTGTTGGAGGACAGCCACTGCTTATACTTGGAGTGGCGGAGCCAACAGTGTTGATGTACACATTTATGTTTAACTTTGCTAAGGACCGGAAGGATTTGGGGCAGGAACTCTTCTTGGCCTGGACAGGATGGGTTTGTGTATGGACAGCCCTATTGCTCTTTTTGCTGGCCATTCTGGGAGCATGCTCTATAATCAATAGATTCACACGCATTGCTGGTGAATTATTTGGTCTGCTTATTGCAATGCTCTTTATGCAGCAGGCTATTCGGGGAGTTGTGGAGGAATTTGGAATACCCCAGAGAGAAGATCGTAACCAAACTGCATTCCTGCCCTCTTGGCGCTTTGGCAATGGAATGTTTGCATTGGTTTTGTCCTTTGGCTTACTTCTTACTGCATTAAGGAGCCGTAAGGCTAGATCCTGGCGCTATGGTACAGGCTGGTTACGGGGGCTTATTGCGGATTATGGAGTCCCATTTATGGTGGTTGTGTGGACTGCTGTATCTTATATACCGGTTAATGATGTCCCAAAAGGGATCCCACGGCGGCTTTTCAGCCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTATCAAGGAAATGTTGGATGTCCCCCCACTGTACATTGTTGGGGCATTTATTCCAGCAACTATGATTGCTGTGCTGTACTACTTTGATCACAGTGTTGCGTCTCAACTTGCACAGCAAAAGGAGTTCAATCTGAAGAAACCAGCTTCATATCACTATGATCTTCTTCTTTTGGGTTTCTTGGTCATATTGTGTGGTCTTATTGGCATTCCTCCTTCCAATGGAGTTATTCCACAATCTCCAATGCATACAAAAAGCTTAGCCACTCTGAAACATCAGCTTTTGCGGAATAAGCTCGTATCGACTGTCCGAAAAAGTATGCGTAAAAATGCAAACCTGGGTCAACTGTACAGTAGCATGCAAGAAGCATACAATGAAATGCAGACTCCACTTGTTTATCAAACTCCCCCTGCTCTGGGACTGAAAGAGCTGAAAGAATCCACAATCCAACTGGCCTCAAGTACAGGCTTCATTGATGCCCCAGTTGATGAGACGGTCTTTGATGTGGATAAAGATGTAGATGATCTTTTACCGGTTGAAGTCAAAGAACAACGCCTTAGCAATCTACTTCAGGCAATGATGGTTGGTGCGTGTGTTGCTGCCATGCCTGTTCTGAAGAAGATACCAACTTCAGTTCTTTGGGGCTATTTTGCTTTCATGGCGATTGAAAGCTTGCCTGGAAATCAGTTCTGGGAGAGAATTCTGTTACTTTTCACTGCTCCAAGTCGAAGATACAAGGTGTTGGAGGAGTGTCATGCAACATTTGTTGAGACTGTGCCATTCAAAGCAATTGCCACCTTCACCTTGTTCCAGACGGTCTACTTGCTTGTGTGTTTTGGTATAACATGGATCCCAATAGCTGGGGTCCTTTTCCCAATGATGATCATGCTTCTCGTTCCAGTACGGCAGTATTTGCTCCCCAAGTTTTTCAAAGGAGTCCATCTTCAAGAACTGGATGCAGCGGAATATGAAGAAGCCCCTGCCATGACTTTCAACATGTCATGTGAAGATCAGGATCCTCAAGCAAGAACTACCCACATTGATAGTGGGGAAATTCTTGATGAAATGATCACAAGAAGCCGTGGTGAGATCCGTAATACACAGAGCCCAAAAGTAACAAGCTCATCCCCTGCCTCACTAGGGGATATGAAACCTGCATATAGCCCTAGGCTATCACAGAGGGCATACAGCCCACGCTTGAGTGAGTTGAGGGCAGAACAGAGCCCCAGATTCACTGGAAAGGGAGTTGAGCTGAAAGAAACTCCCAGTCCTAGGCCATCTATCCTTGGGAAAAGTCCTCATGGTTCGTCTTCAAGCTAA 2163 0.4545 MEETFVPFRGIKNDLKGRILCYKQDWTGGLRAGIGILAPTTYIFFASAIPVISFGEQLERYTNGTLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVLMYTFMFNFAKDRKDLGQELFLAWTGWVCVWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIRGVVEEFGIPQREDRNQTAFLPSWRFGNGMFALVLSFGLLLTALRSRKARSWRYGTGWLRGLIADYGVPFMVVVWTAVSYIPVNDVPKGIPRRLFSPNPWSPGAYSNWTVIKEMLDVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTVRKSMRKNANLGQLYSSMQEAYNEMQTPLVYQTPPALGLKELKESTIQLASSTGFIDAPVDETVFDVDKDVDDLLPVEVKEQRLSNLLQAMMVGACVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEECHATFVETVPFKAIATFTLFQTVYLLVCFGITWIPIAGVLFPMMIMLLVPVRQYLLPKFFKGVHLQELDAAEYEEAPAMTFNMSCEDQDPQARTTHIDSGEILDEMITRSRGEIRNTQSPKVTSSSPASLGDMKPAYSPRLSQRAYSPRLSELRAEQSPRFTGKGVELKETPSPRPSILGKSPHGSSSS* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0846 720 PANTHER ANION EXCHANGE PROTEIN 2 608 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vvi17g0846 720 MobiDBLite consensus disorder prediction 641 720 - -
Vvi17g0846 720 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016020
Vvi17g0846 720 Pfam HCO3- transporter family 7 179 IPR011531 GO:0006820|GO:0016020
Vvi17g0846 720 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016020
Vvi17g0846 720 MobiDBLite consensus disorder prediction 643 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0846 Vvi-Chr17 9807359 9812409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0846 1 696 Antiporters AT3G62270 77.155 0.0 1116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0846 K24194 - vvi:100251908 1403.27