Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi17g0831 | ATGCCTTCTGTGAAAAGTAAGGAGAATTTGCAATGTTCAGTGTGTTTGGATGATTTTGAGATTAGCGCTGAGGCAGGGGAGATGCCATGTAAGCATAAATTCCACAGTGGGTGTATTCTGCCATGGCTGGAGCTTCATAGCTCTTGTCCAGTCCGCATGTTTCAGATAGCAGCTGATGAATCCAAGCTTGATTCAGATGCTTCTCAGAATGTTAGCAGTAACAATGGCCATGGTAGCAGTGAAGGTGGAGTGAGGTTTTTTTGTAGTGCTAGTAGCCTAGTACTTAGGCTTTTCAATGGTTCTGATCAAGCATGGAAAAGCGTCACAAATCTGCCATGGAAGCTGACCAGACAAAGCTTGTTTTTGGAGTGCTTTTCTCTCTTGTTGTTGTGGTTTTTACTGCAACGGACCCAAATGACCTTGCAATTCTGA | 432 | 0.4375 | MPSVKSKENLQCSVCLDDFEISAEAGEMPCKHKFHSGCILPWLELHSSCPVRMFQIAADESKLDSDASQNVSSNNGHGSSEGGVRFFCSASSLVLRLFNGSDQAWKSVTNLPWKLTRQSLFLECFSLLLLWFLLQRTQMTLQF* | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi17g0831 | 143 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 71 | IPR013083 | - | |
Vvi17g0831 | 143 | ProSiteProfiles | Zinc finger RING-type profile. | 12 | 51 | IPR001841 | - | |
Vvi17g0831 | 143 | SMART | ring_2 | 12 | 52 | IPR001841 | - | |
Vvi17g0831 | 143 | Pfam | Ring finger domain | 11 | 51 | IPR001841 | - | |
Vvi17g0831 | 143 | SUPERFAMILY | RING/U-box | 5 | 51 | - | - | |
Vvi17g0831 | 143 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 2 | 55 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi17g0831 | Vvi-Chr17 | 9600692 | 9601123 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi17g0831 | 12 | 74 | C3H Transcription Factor Family | AT1G68180 | 35.385 | 1.31e-12 | 61.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi17g0831 | K11982 | - | vvi:100250148 | 142.51 |