Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0798 ATGAGCCCCTATGAAAGGTCGCGGATATTGTTGCGGTTTGCTGATTTAGCCGAGAAACACAATGATGAGCTTGCAGCTCTAGAGACATGGAATAATGGGAAGCCATATGAACAGGCTGCCAAAGCTGAATTGCCACTGTTTGTTCGTCTATTTCGCTATTATGCAGGTTGGGCAGATAAAATCCATGGTTTAACAGTTCAGGCTGATGGCCCACACCATGTTCAGATATTGCACGAGCCAATTGGTGTTGCGGGACAGATTATTCCCTGGAATTTTCCTCTTATGATGTTTGCTTGGAAAGTTGGACCTGCACTAGCATGTGGTAATACCATTGTCCTAAAGACAGCAGAGCAAACACCTTTGACTGCTCTCTTTGCGGCAAAGCTATTTCATGAGGCTGGTCTTCCTCCCGGTATTTTAAATATCGTGTCTGGCTATGGTCCGACTGCTGGTGCTGCTCTTGCTAGTCATATGGATGTGGACAAGATTGCTTTCACAGGGTCGACTGATACTGGTAAGATTGTACAAGAATTGGCTTCAAAAAGCAATCTTAAACCAGTAACGCTAGAGCTTGGAGGTAAATCACCTTTCATTGTATGTGAGGATGCTGACATTGATCAAGCTGTAGAGCTAGCACACTTTGCTCTGTTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTCGGACATTTGTTCATGAGAGTGTATACGATGAGTTTATTGAGAAAGCAAAGGCACGTGCTCTGAGTCGCACGGTCGGTGATCCTTTCAAGAAGGGCATCGAGCAAGGTCCTCAGATCGACCCAGAGCAATTTGCGAAGGTTCTCAGATACATAAGATCTGGTATTGAAAGCAATGCCACCCTTGAATGTGGAGGTGGAAGAATTGGCTCAAAAGGCTACTTTGTCCAACCCACTGTTTTCTCAAATGTTCAGGATGATATGCTGATTGCAAAGGATGAGATCTTTGGCCCTGTACAATCCATCTTGAAATACAAGGACCTTGATGAAGTGATTAGGAGGGCAAATTCAACGCGATACGGTCTAGCAGCAGGGGTGTTCACAAAGAACATCAACACTGCCAACACCTTGACAAGAGCATTGAGAGTGGGGACTGTATGGGTGAATTGCTTCGATGTGTTTGATGCTGCAATCCCATTTGGTGGGTACAAGATGAGTGGAGTAGGAAGGGAAAAGGGAATCTACAGCCTCAATAACTACTTGCAGGTGAAGGCTGTGATTACTCCACTGAAGAATCCAGCTTGGTTGTGA 1272 0.4528 MSPYERSRILLRFADLAEKHNDELAALETWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLTVQADGPHHVQILHEPIGVAGQIIPWNFPLMMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHEAGLPPGILNIVSGYGPTAGAALASHMDVDKIAFTGSTDTGKIVQELASKSNLKPVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAKARALSRTVGDPFKKGIEQGPQIDPEQFAKVLRYIRSGIESNATLECGGGRIGSKGYFVQPTVFSNVQDDMLIAKDEIFGPVQSILKYKDLDEVIRRANSTRYGLAAGVFTKNINTANTLTRALRVGTVWVNCFDVFDAAIPFGGYKMSGVGREKGIYSLNNYLQVKAVITPLKNPAWL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0798 423 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 217 228 IPR016160 GO:0016491
Vvi17g0798 423 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 413 IPR016162 GO:0016491
Vvi17g0798 423 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 195 384 IPR016163 GO:0016620
Vvi17g0798 423 FunFam Aldehyde dehydrogenase, putative 385 411 - -
Vvi17g0798 423 Pfam Aldehyde dehydrogenase family 1 413 IPR015590 GO:0016491
Vvi17g0798 423 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 189 196 IPR029510 GO:0016491
Vvi17g0798 423 FunFam Aldehyde dehydrogenase family 1 member A3 1 201 - -
Vvi17g0798 423 FunFam Mitochondrial aldehyde dehydrogenase 2 195 384 - -
Vvi17g0798 423 SUPERFAMILY ALDH-like 1 417 IPR016161 GO:0016491
Vvi17g0798 423 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0798 Vvi-Chr17 9065231 9068184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0798 1 423 Aldehyde Dehydrogenase Gene Family AT3G48000 82.033 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0798 K00128 - vvi:100262043 858.211