Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0787 ATGGAGGAACACTTCAACTCAATACCTGCTATTCATCTCCTTCAACATACCTTAAGAAGCTTGTGTATTCATGAAGACTCCCTGTGGGTATATGCAGTTTTTTGGAGAATCTTACCTAGAAACTATCCACCACCAAATTGGGATTTCCAAGGAGCTTTTGACAGGTCAAGAGGAAACAGGAGGAATTGGATACTGGTATGGGAGGATGGCTTCTGCAACTTCATTCCTTCAACCACTGAGATTAATCCTGGAGCAGGATCCTCAGTTCACAGAAACTCTGAAGTTAGACTCCTCGAACTGCAACCAGAGCTATTTTTCAAGATGTCACATGAAATCTACAAATATGGAGAGGACTTGATTGGAAAAGTTGCTGCAGATCATAGTCATAAATGGATTTACAAAGAACATAGTGATCCAGAAAACAATCTTTTCTCTGCATGGCAAAACTTGGGAGACCTTCATCCAAGGACATGGAGGGCTCAGTTTCAGTCCGGCATAAAGACAATAGCTTTGATTGCAGTGAAGGAAGGCGTTCTTCAATTGGGATCTGTTAAAAAGGTGACAGAAGACCTCAATTATGTTACTATCCTACAAAAGAAATTCACTCATCTCCTTAGTATCCCCGGTTTCCTCCTACCTCATCCAGCATCATGGTCATCGTCATCAATTCCATCCAAGACTAATTGTGGCAGTGACAACATTGTGTCCAACACCTGTCCTTTCCAAGCAGCTTGCCCTCCCCTGACAGCAATGAATTTCTATGATCATGCCAATCAGCCAATGGTTATCACTCCATCTATGAGCAGCCTTGAGGCACTCCTCTCAAAGCTCCCATCCGTTGAGCCAACACCGTCCACACCTTTGTCTGGCTACCATGAGACACCACCAAGGCTAATATCCATCCAAAAGCCACTGGAACTGGATATCGAGGTGGTAGCAATGGAGATAAATGAAAGGAAAGAACATTAG 969 0.4334 MEEHFNSIPAIHLLQHTLRSLCIHEDSLWVYAVFWRILPRNYPPPNWDFQGAFDRSRGNRRNWILVWEDGFCNFIPSTTEINPGAGSSVHRNSEVRLLELQPELFFKMSHEIYKYGEDLIGKVAADHSHKWIYKEHSDPENNLFSAWQNLGDLHPRTWRAQFQSGIKTIALIAVKEGVLQLGSVKKVTEDLNYVTILQKKFTHLLSIPGFLLPHPASWSSSSIPSKTNCGSDNIVSNTCPFQAACPPLTAMNFYDHANQPMVITPSMSSLEALLSKLPSVEPTPSTPLSGYHETPPRLISIQKPLELDIEVVAMEINERKEH* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0787 322 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 291 - -
Vvi17g0787 322 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 201 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0787 Vvi-Chr17 8922864 8924721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0787 15 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.414 8.15e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0787 - - vvi:100241544 659.062