Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0786 ATGGGGATGAAGGCATGGTTGTCAGGAATAGTGCCAATTGCAGCTATGGTGATGATGGAGTGTCTTGATGTGGGGTTGGTCACTCTCAGCAAAGCAGCCATGTCCAGAGGAATGAATCACTTTGTCTTTGTTGTCTACTACAACGCTCTTGCCTCCCTCATCTTCTTTCTTCTTTCCTTCATCTTCCACAGAACAAAGAGGCCCCCTCTCACTTTCTCTCACTTCTGTAAATTCTTCCTTCTCGGACTTCCTGGGATTACAGTGATGCAGAACTGGGTATTCACAGGCGTAAGTTACAGTTCACCCACACTTTGTTATGCTATGAGCAACTTGATCCCTGCTTTCACTTTCTTGCTTGCTGTTGCTATCAGACTTGAAGATTTGGATTTGAGAAGCTCAAGAAGCCAGATAAAACTCCTAGACAATTGGGTCATTGGAGGCCTTTTTTTTGCAGCTGCTTGTCTTTCACTTTCAGCATGGAACACTTGCCAGGCACCAATTCTGTCAAGCTGCTACCCATCAAATATCACCGTAATTTCCTTTATCACATTGTTTGGGGCGATTCAGAGTACAGCAGTTTCTCTGATTGCCGTGAGAGACTCAAATGCTTGGAAACTAAGGCCTGATATTGAACTCATCTCTATAATCTACTCAGCTATTATTGGTGTGGTAGCATTTTTTGTACAAAATTGGTGCATAAGGAGGAAAGGGCCTGTTTTTGCGTCAATGTTCAAACCCTTGGGCATGGGAATTGCTGCCATAATAGGTGTCATCTTCCTTGGCGAAACACTCCACATTGGAAGTGTTATAGGAGCAATTATAATTGCCACAGGCTGTTATGTAGTGGCATGGCTACAATACAGAGAAGAGGAAGAGAGTAAAGTCTGTGAAGTTGTCATGCTGCCTTCAACCTTTGAGAAGGCCCCAATGTTGGATGAGCCAGAGGGAAGCATGAGCCAATTTGATGGGTTTCACTGTGGATACAAGGAATATAATCCTGTTTATTCTGTAACATAA 1017 0.4346 MGMKAWLSGIVPIAAMVMMECLDVGLVTLSKAAMSRGMNHFVFVVYYNALASLIFFLLSFIFHRTKRPPLTFSHFCKFFLLGLPGITVMQNWVFTGVSYSSPTLCYAMSNLIPAFTFLLAVAIRLEDLDLRSSRSQIKLLDNWVIGGLFFAAACLSLSAWNTCQAPILSSCYPSNITVISFITLFGAIQSTAVSLIAVRDSNAWKLRPDIELISIIYSAIIGVVAFFVQNWCIRRKGPVFASMFKPLGMGIAAIIGVIFLGETLHIGSVIGAIIIATGCYVVAWLQYREEEESKVCEVVMLPSTFEKAPMLDEPEGSMSQFDGFHCGYKEYNPVYSVT* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0786 338 PANTHER WAT1-RELATED PROTEIN 142 293 IPR030184 GO:0016020|GO:0022857
Vvi17g0786 338 Pfam EamA-like transporter family 146 283 IPR000620 GO:0016020
Vvi17g0786 338 Pfam EamA-like transporter family 27 129 IPR000620 GO:0016020
Vvi17g0786 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 212 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0786 Vvi-Chr17 8903187 8905229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0786 4 311 Nodulin-like Gene Family AT5G40240 37.110 3.87e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0786 - - vvi:100258709 629.017