Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0784 ATGGTGCCAATTGCAGCTATGGTGACGGTGGAGTGCCTTGACGTCGGGTTGACCACACTCAGCAAAGCAGCTATGTCCAGAGGAATGGATCGCTTTGTCTTTGTTGTCTACTCCAATGCTTTTGCCTCCCTCATCCTCTTCTCTATATCCTTCATCTTCCTCAGAACAAAGAGACCTCCTCTAAGTTTCTCTCTCCTCTGCAAATTCTTCCTCCTCAGCCTGGCTGGGATTACTGTGATGCAGAACTGTGTATTCACAGGCGTAAGCTACGGTTCACCAACGCTTGGCTCTGCTATGAGCAACTTGATCCCTGCTTTCACTTTCTTGCTTGCTGTTGCTTTCAGATTGGAGAACTTGGATTTGAGAAGCTCAAGAAGCCTGATAAAAATCCTGGGCACCCTAGTGTCAATCTCGGGAGCACTGATCGTAACCCTTTACAAGGGTCCTCCCATTGGTGCCGGATTGATTAAATCCCCATCAATCTCCTCCAACGACCATCTTCAGAAAACTGCAAACAATTGGGTTATTGGAGGCCTTTTCTTTGCTATGGCTGGTCTTTCAATTTCAGTATGGAACATTTTCCAGGCACCAATTCTGAGAAGGTACCCATCAGAGATTACCATAGTTTCCTTTTTCACATTGTTTGGGGCAATTCAATGTGCGGCAGTTGCTTTGATTGCAGTGAAAGACTCGAATGCTTGGAAACTAAGGCCCGATTTTGAACTCATCACTATAATCTACTCCGCTGTTTTTGGAGGTGTAGTGTCATTTTGTGTACAAACATGGTGCATAAAGAGGAAAGGGCCTGTTTTTGTGGCAATATTCAAGCCCTTGGGCATCGGAATTGCTGCCATAATGGGTGTCATCTTTCTTGGCGACACACTCTACATTGGAAGTGTTATAGGAGCAATTATAATCGTCACAGGTTTTTATGGAGTGATGTGGGCGCAAACCAAAGAAGGCGAAAAGGGTGAAGCCCAAGAAGTTGATGGGCTGCCGTCAACCTCAGAGAAGGCCCCTCTGCTGCAGAGCCGCAGAGATGAACAAAAGTGGTTGGATTAA 1062 0.4605 MVPIAAMVTVECLDVGLTTLSKAAMSRGMDRFVFVVYSNAFASLILFSISFIFLRTKRPPLSFSLLCKFFLLSLAGITVMQNCVFTGVSYGSPTLGSAMSNLIPAFTFLLAVAFRLENLDLRSSRSLIKILGTLVSISGALIVTLYKGPPIGAGLIKSPSISSNDHLQKTANNWVIGGLFFAMAGLSISVWNIFQAPILRRYPSEITIVSFFTLFGAIQCAAVALIAVKDSNAWKLRPDFELITIIYSAVFGGVVSFCVQTWCIKRKGPVFVAIFKPLGIGIAAIMGVIFLGDTLYIGSVIGAIIIVTGFYGVMWAQTKEGEKGEAQEVDGLPSTSEKAPLLQSRRDEQKWLD* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0784 353 Pfam EamA-like transporter family 17 144 IPR000620 GO:0016020
Vvi17g0784 353 Pfam EamA-like transporter family 177 314 IPR000620 GO:0016020
Vvi17g0784 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 318 - -
Vvi17g0784 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 147 - -
Vvi17g0784 353 PANTHER WAT1-RELATED PROTEIN 3 321 IPR030184 GO:0016020|GO:0022857
Vvi17g0784 353 MobiDBLite consensus disorder prediction 324 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0784 Vvi-Chr17 8880537 8882504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0784 1 350 Nodulin-like Gene Family AT3G28050 44.904 3.03e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0784 - - vvi:100258662 661.759