Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0761 ATGATTTTATGGGATATTCCGGCGGCCACCGGTGAAGATGTGGAGCTTGCTGTGGATGCTGCCCGAAGAGCCTTTGCCAGGAATAAGGAGGCAAATTGGGTTAACGCGCCTGGTGTTGTTCGTGCTAAGTATTTGCGTGCCATTGCTGCCAAGATAAGAGAGAGAAAGTCTGAATTGGCCAAACTCGAGGCAATTGATAGTGGAAAACCTCTGGATGAAACAACATGGGATATTGATGATGAGCCCGTTGGTGTTGTTGGATTGATTACACCATGGAATTACCCGCTGCTATTGGCTACATGGAAAGTAGCTCCTGCCCTGGCTGCTGGTTGTGCAGCAATACTAAAGCCATCCGAGTTGGCTTCTGTGACTTGTTTAGAGCTAGCTGATGTGTGTATAGAGGTGGGTCTGCCATAA 417 0.482 MILWDIPAATGEDVELAVDAARRAFARNKEANWVNAPGVVRAKYLRAIAAKIRERKSELAKLEAIDSGKPLDETTWDIDDEPVGVVGLITPWNYPLLLATWKVAPALAAGCAAILKPSELASVTCLELADVCIEVGLP* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0761 138 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 138 IPR016162 GO:0016491
Vvi17g0761 138 Pfam Aldehyde dehydrogenase family 3 79 IPR015590 GO:0016491
Vvi17g0761 138 Pfam Aldehyde dehydrogenase family 80 138 IPR015590 GO:0016491
Vvi17g0761 138 PANTHER ALDEHYDE DEHYDROGENASE 80 138 - -
Vvi17g0761 138 SUPERFAMILY ALDH-like 3 138 IPR016161 GO:0016491
Vvi17g0761 138 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 77 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0761 Vvi-Chr17 8629208 8645710 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0761 2 138 Aldehyde Dehydrogenase Gene Family AT3G48170 61.272 1.34e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0761 K00130 - vvi:100246770 219.55