Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0760 ATGACAGCTGCAGCTCAATTGGTGAAGCCTGTTTCATTGGAGCTTGGTGGAAAGAGTTCCATTCTTGTGTTTGAGGATGTTGACCTTGACAAGGCTGCTGAATGGACTGCCTTTGGTTGCTTTTGGACAAATGGCCAAATATGTAGTGCAACTTCTCGTCTTCTTGTGCAAGAAAGCACTGCAGCAGAATTTTTAGACAAGCTTGTGAAATGGACCAAAAATATCAAGATTTCAGATCCCTTGGAAGAAGGTTGTAAACTTGGTCCTGTTGTCAGCAGAGGGCAGTATGAGAAGTTATCAGAGTTTATTTCAACAGCTACGAGTGAAGATGGAACAGTATTGTGTGGTGGGGGTTGTCCCCAGCATTTGAAGAGGGGTTTCTTCATTGAACCAACCATTATAAGTGATGTGACTACCTCCATGCAAATTTGGAGAGAGGAAGTTTTTGGACCTGTCCTATGTGTTAAAACACTTAGTACTGAAGATGAAGCCATTGAACTAGCAAATGACAGCTCTTATGCCTTAGCAGGTGCTGTAATTTCAGATGATCTGGAGAGGTGTGATCGTGTGTCAAAGGCCCTTAATGCAGGGATTGTATGGGTCAACTGCTCACAGCCATGCTTCTACCAAGCTCCATGGGGAGGCAATAAGCGTAGTGGTTTTGGGCGTGAACTAGGGCCATGGGGACTTGATAACTACTTAAATGTGAAGCAGGTCACTCAGTACATCTCCAGTGAACCATGGGGCTAG 750 0.4453 MTAAAQLVKPVSLELGGKSSILVFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLVQESTAAEFLDKLVKWTKNIKISDPLEEGCKLGPVVSRGQYEKLSEFISTATSEDGTVLCGGGCPQHLKRGFFIEPTIISDVTTSMQIWREEVFGPVLCVKTLSTEDEAIELANDSSYALAGAVISDDLERCDRVSKALNAGIVWVNCSQPCFYQAPWGGNKRSGFGRELGPWGLDNYLNVKQVTQYISSEPWG* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0760 249 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 17 209 IPR016163 GO:0016620
Vvi17g0760 249 Pfam Aldehyde dehydrogenase family 1 239 IPR015590 GO:0016491
Vvi17g0760 249 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 237 IPR016162 GO:0016491
Vvi17g0760 249 SUPERFAMILY ALDH-like 1 242 IPR016161 GO:0016491
Vvi17g0760 249 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 41 52 IPR016160 GO:0016491
Vvi17g0760 249 FunFam Betaine aldehyde dehydrogenase 17 208 - -
Vvi17g0760 249 PANTHER ALDEHYDE DEHYDROGENASE 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0760 Vvi-Chr17 8622063 8628980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0760 1 249 Aldehyde Dehydrogenase Gene Family AT3G48170 79.920 1.61e-150 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0760 K00130 - vvi:100246770 454.136